C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: artemin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000117407 ARTN 9606 + 1:43933320-43937241 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372354 ARTN-002 43935359-43936807 protein_coding
  ENST00000372359 ARTN-001 43933320-43937241 protein_coding
  ENST00000414809 ARTN-201 43933320-43937239 protein_coding
  ENST00000438616 ARTN-010 43935807-43936765 protein_coding
  ENST00000471394 ARTN-005 43933719-43936231 protein_coding
  ENST00000472435 ARTN-006 43934198-43936345 protein_coding
  ENST00000474592 ARTN-009 43934387-43936346 protein_coding
  ENST00000477048 ARTN-004 43933675-43936231 protein_coding
  ENST00000479128 ARTN-008 43934195-43936346 protein_coding
  ENST00000491846 ARTN-007 43933846-43936346 protein_coding
  ENST00000498139 ARTN-003 43933812-43937240 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372354ENST00000372359ENST00000414809ENST00000438616ENST00000471394ENST00000472435ENST00000474592ENST00000477048ENST00000479128ENST00000491846ENST00000498139
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372354 N/A N/A 0.110±0.01 N/A N/A N/A N/A N/A N/A N/A 0.323±0.00 N/A N/A
ENST00000372359 N/A 0.641±0.00 0.075±0.00 N/A N/A 0.030±0.00 N/A N/A N/A N/A 0.245±0.00 1.617±0.00 N/A
ENST00000414809 N/A N/A N/A N/A N/A N/A N/A N/A 0.951±0.00 N/A N/A 1.451±0.00 N/A
ENST00000438616 N/A N/A 0.113±0.00 N/A N/A 0.114±0.00 N/A N/A 1.112±0.00 N/A N/A N/A 0.637±0.00
ENST00000471394 N/A N/A N/A 0.180±0.00 0.528±0.00 N/A N/A N/A N/A 0.621±0.00 N/A 0.168±0.00 N/A
ENST00000472435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.048±0.00
ENST00000474592 N/A N/A 0.131±0.00 N/A N/A N/A 0.553±0.00 N/A N/A N/A N/A N/A 1.122±0.00
ENST00000477048 N/A N/A N/A N/A N/A 0.067±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000479128 N/A N/A N/A N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000491846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.348±0.00 N/A N/A
ENST00000498139 0.256±0.00 N/A 0.081±0.00 0.107±0.00 0.425±0.15 N/A 1.003±0.00 0.106±0.01 1.767±0.00 0.055±0.00 1.003±0.59 1.266±0.87 0.521±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005B9 CIL_0005B9_0002 CGP 1:43705824-43937241
CIL_0009B8 CIL_0009B8_0001 VISTA 1:43734711-44337665

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005102 TAS receptor binding
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0007165 TAS signal transduction
GO:0007405 TAS neuroblast proliferation
GO:0007411 TAS axon guidance
GO:0007422 IEA peripheral nervous system development
GO:0008083 IEA growth factor activity
GO:0050930 IEA induction of positive chemotaxis
GO:0061146 IEA Peyer's patch morphogenesis
GO:0097021 IEA lymphocyte migration into lymphoid organs

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000096252 artna artemin a protein_coding Danio_rerio
ENSMUSG00000028539 Artn artemin protein_coding Mus_musculus

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