C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000117411 B4GALT2 9606 + 1:43978943-43991170 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309519 B4GALT2-201 43979936-43991170 protein_coding
  ENST00000356836 B4GALT2-001 43979877-43991168 protein_coding
  ENST00000372324 B4GALT2-202 43979202-43991170 protein_coding
  ENST00000434555 B4GALT2-002 43979436-43991168 protein_coding
  ENST00000481924 B4GALT2-006 43984865-43986206 processed_transcript
  ENST00000485678 B4GALT2-005 43980018-43985399 processed_transcript
  ENST00000497866 B4GALT2-004 43979237-43981923 processed_transcript
  ENST00000498543 B4GALT2-003 43978943-43981327 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309519ENST00000356836ENST00000372324ENST00000434555ENST00000481924ENST00000485678ENST00000497866
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309519 N/A N/A N/A 2.691±0.00 N/A N/A N/A N/A 2.610±0.00 N/A 5.278±0.00 1.164±0.00 3.986±0.00 N/A
ENST00000356836 N/A N/A N/A N/A N/A 0.804±0.00 N/A N/A N/A N/A N/A 2.260±1.89 N/A 2.000±0.00
ENST00000372324 N/A 5.228±0.00 N/A 4.223±0.00 13.655±0.00 5.107±4.26 11.445±0.00 10.957±0.00 N/A 3.890±3.10 16.327±0.00 42.427±0.00 10.152±4.57 15.690±0.00
ENST00000434555 20.386±0.00 5.209±0.00 0.298±0.00 9.059±5.12 8.600±5.69 16.811±0.00 1.506±1.09 4.424±2.80 4.402±2.92 8.254±0.00 5.472±4.29 9.538±6.39 7.950±3.59 16.035±2.27
ENST00000481924 N/A N/A 0.896±0.00 N/A N/A N/A N/A 1.564±0.00 N/A N/A N/A N/A N/A N/A
ENST00000485678 N/A N/A N/A N/A N/A N/A 0.253±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000497866 N/A N/A N/A N/A N/A N/A N/A N/A 2.727±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B8 CIL_0009B8_0001 VISTA 1:43734711-44337665
CIL_0008SF CIL_0008SF_0001 VISTA 1:43949748-44550457

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0003831 IEA beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0003945 IEA N-acetyllactosamine synthase activity
GO:0004461 IEA lactose synthase activity
GO:0005975 TAS carbohydrate metabolic process
GO:0008378 TAS galactosyltransferase activity
GO:0016021 IEA integral component of membrane
GO:0018146 TAS keratan sulfate biosynthetic process
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0042339 TAS keratan sulfate metabolic process
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077994 b4galt2 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 protein_coding Danio_rerio
ENSMUSG00000028541 B4galt2 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 protein_coding Mus_musculus

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