C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane emp24 protein transport domain containing 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000117500 TMED5 9606 - 1:93149742-93180728 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000370280 TMED5-004 93156040-93180261 protein_coding
  ENST00000370282 TMED5-001 93149742-93180728 protein_coding
  ENST00000370290 TMED5-002 93151858-93180516 nonsense_mediated_decay
  ENST00000479918 TMED5-005 93154232-93180361 protein_coding
  ENST00000483033 TMED5-003 93154196-93163210 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000370280ENST00000370282ENST00000370290ENST00000479918
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000370280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 31.271±0.00 N/A
ENST00000370282 2.221±0.00 3.587±0.00 N/A N/A 4.236±0.00 3.493±0.19 2.183±1.29 8.851±0.00 7.373±0.00 4.199±0.00 4.269±0.00 2.793±0.35 1.753±0.55 N/A
ENST00000370290 10.839±0.00 5.127±0.00 6.156±0.00 8.704±4.44 10.368±4.06 9.179±2.42 5.724±3.53 15.843±8.28 11.153±5.83 9.745±2.26 9.976±6.62 5.382±1.05 7.666±2.32 9.461±0.00
ENST00000479918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.576±0.00 16.822±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZQ CIL_0005ZQ_0001 CGP 1:93079235-93180728
CIL_0005ZV CIL_0005ZV_0001 CGP 1:93149742-93278730

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005793 IDA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IEA Golgi apparatus
GO:0005801 IDA cis-Golgi network
GO:0006810 IEA transport
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0070971 IDA endoplasmic reticulum exit site
GO:0090161 IMP Golgi ribbon formation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008765 tmed5 transmembrane emp24 protein transport domain containing 5 protein_coding Danio_rerio
ENSMUSG00000063406 Tmed5 transmembrane emp24 protein transport domain containing 5 protein_coding Mus_musculus

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