C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dehydrodolichyl diphosphate synthase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000117682 DHDDS 9606 + 1:26432282-26471294 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000236342 DHDDS-011 26432339-26469439 protein_coding
  ENST00000360009 DHDDS-001 26432355-26471294 protein_coding
  ENST00000374185 DHDDS-005 26432342-26448176 protein_coding
  ENST00000374186 DHDDS-004 26432329-26443080 retained_intron
  ENST00000416052 DHDDS-010 26446364-26467527 protein_coding
  ENST00000427245 DHDDS-006 26432316-26448565 protein_coding
  ENST00000430232 DHDDS-008 26432891-26460144 protein_coding
  ENST00000431933 DHDDS-012 26442836-26471294 protein_coding
  ENST00000434391 DHDDS-002 26432282-26471294 nonsense_mediated_decay
  ENST00000436153 DHDDS-007 26432390-26447639 protein_coding
  ENST00000487944 DHDDS-003 26432345-26438734 retained_intron
  ENST00000525165 DHDDS-020 26432368-26446359 protein_coding
  ENST00000525326 DHDDS-023 26432371-26442763 protein_coding
  ENST00000525410 DHDDS-026 26432778-26446396 retained_intron
  ENST00000525546 DHDDS-022 26432371-26442805 protein_coding
  ENST00000525682 DHDDS-009 26432339-26469373 protein_coding
  ENST00000526219 DHDDS-013 26432340-26469226 protein_coding
  ENST00000526278 DHDDS-028 26432386-26446432 retained_intron
  ENST00000527611 DHDDS-024 26432323-26433133 retained_intron
  ENST00000528557 DHDDS-021 26432371-26442889 processed_transcript
  ENST00000529688 DHDDS-029 26432398-26446382 retained_intron
  ENST00000530781 DHDDS-025 26432403-26438284 protein_coding
  ENST00000531312 DHDDS-015 26432367-26446384 protein_coding
  ENST00000531955 DHDDS-027 26432726-26442889 processed_transcript
  ENST00000533087 DHDDS-018 26432366-26447615 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000236342ENST00000360009ENST00000374185ENST00000430232ENST00000431933ENST00000434391ENST00000436153ENST00000487944ENST00000525165ENST00000526219
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000236342 N/A N/A N/A 2.151±0.09 N/A N/A N/A N/A N/A N/A N/A 3.531±2.39 3.300±0.00 N/A
ENST00000360009 5.842±0.00 4.644±0.00 0.418±0.00 2.452±0.00 23.721±0.00 N/A 1.651±1.24 N/A 2.328±0.53 2.396±0.00 4.167±0.00 2.858±1.37 3.882±1.33 3.293±0.00
ENST00000374185 N/A N/A N/A N/A N/A N/A N/A 1.151±0.00 N/A 1.220±0.00 N/A N/A N/A N/A
ENST00000430232 N/A N/A N/A N/A 6.004±0.00 N/A N/A N/A N/A 2.863±0.00 N/A N/A N/A N/A
ENST00000431933 N/A N/A N/A N/A N/A N/A N/A N/A 1.343±0.00 N/A 1.518±0.00 2.121±0.00 2.179±0.00 N/A
ENST00000434391 N/A 1.318±0.00 1.265±0.00 2.905±0.00 2.163±0.00 4.990±0.00 0.714±0.00 N/A 0.905±0.00 N/A N/A 2.500±0.84 2.365±1.27 3.716±0.00
ENST00000436153 N/A N/A N/A N/A N/A N/A N/A N/A 5.226±0.00 N/A N/A N/A N/A N/A
ENST00000487944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.824±0.00 N/A N/A
ENST00000525165 N/A N/A 2.367±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526219 5.033±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.799±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T4 CIL_0007T4_0001 VISTA 1:26423129-27024414

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006488 TAS dolichol-linked oligosaccharide biosynthetic process
GO:0006489 TAS dolichyl diphosphate biosynthetic process
GO:0008152 IEA metabolic process
GO:0016765 IEA transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039851 dhdds dehydrodolichyl diphosphate synthase protein_coding Danio_rerio
ENSMUSG00000012117 Dhdds dehydrodolichyl diphosphate synthase protein_coding Mus_musculus

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