C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NSL1, MIS12 kinetochore complex component
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000117697 NSL1 9606 - 1:212726153-212791782 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000366976 NSL1-002 212738483-212791782 protein_coding
  ENST00000366977 NSL1-001 212736956-212791782 protein_coding
  ENST00000366978 NSL1-005 212726153-212791581 protein_coding
  ENST00000473995 NSL1-004 212781932-212791615 processed_transcript
  ENST00000487995 NSL1-003 212784141-212791782 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366976ENST00000366977ENST00000366978ENST00000473995
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366976 5.048±0.00 6.012±0.00 7.941±0.00 6.642±0.00 N/A 3.975±0.00 2.698±1.64 N/A 2.894±0.43 2.050±0.41 6.349±5.04 8.040±6.42 15.059±6.02
ENST00000366977 2.034±0.00 4.807±0.00 3.837±0.05 3.306±0.35 1.383±0.28 1.812±1.05 3.296±0.78 0.833±0.00 1.637±0.03 0.898±0.15 3.861±2.21 4.698±1.23 4.193±2.82
ENST00000366978 N/A 1.975±0.00 N/A N/A N/A N/A N/A 1.340±0.00 N/A N/A N/A N/A N/A
ENST00000473995 N/A N/A N/A N/A 1.660±0.00 N/A N/A 2.778±0.00 N/A N/A 1.851±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JQ CIL_0008JQ_0001 VISTA 1:212231404-212833951
CIL_00012B CIL_00012B_0002 CGP 1:212686418-212791782

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000444 IDA MIS12/MIND type complex
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol
GO:0007059 IEA chromosome segregation
GO:0007067 IEA mitotic nuclear division

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024471 nsl1 NSL1, MIND kinetochore complex component, homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000062510 Nsl1 NSL1, MIND kinetochore complex component, homolog (S. cerevisiae) protein_coding Mus_musculus

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