C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 5 (sodium/sugar cotransporter), member 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000117834 SLC5A9 9606 + 1:48222685-48248644 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000236495 SLC5A9-001 48222687-48248644 protein_coding
  ENST00000425816 SLC5A9-006 48222685-48247601 nonsense_mediated_decay
  ENST00000438567 SLC5A9-004 48222685-48248640 protein_coding
  ENST00000441260 SLC5A9-005 48222739-48237707 nonsense_mediated_decay
  ENST00000471020 SLC5A9-003 48240384-48248638 processed_transcript
  ENST00000493837 SLC5A9-002 48222707-48248643 retained_intron
  ENST00000525901 SLC5A9-010 48238426-48242578 processed_transcript
  ENST00000527929 SLC5A9-009 48229080-48231578 retained_intron
  ENST00000532322 SLC5A9-008 48239387-48247718 nonsense_mediated_decay
  ENST00000533824 SLC5A9-007 48222685-48247601 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000236495ENST00000425816ENST00000438567ENST00000441260ENST00000471020ENST00000493837ENST00000525901ENST00000532322ENST00000533824
Transcript ID Adipose Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000236495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.197±0.00
ENST00000425816 N/A N/A N/A N/A N/A N/A 0.801±0.00 N/A N/A N/A N/A
ENST00000438567 N/A N/A N/A N/A N/A N/A 0.449±0.00 N/A N/A 0.040±0.00 0.071±0.00
ENST00000441260 N/A N/A 0.110±0.00 N/A N/A N/A N/A 1.074±0.00 N/A N/A N/A
ENST00000471020 N/A 0.094±0.02 N/A N/A 0.079±0.00 N/A N/A 0.098±0.00 N/A 0.054±0.01 N/A
ENST00000493837 0.031±0.00 0.076±0.00 N/A N/A N/A N/A N/A N/A 0.188±0.00 N/A N/A
ENST00000525901 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.137±0.00 N/A
ENST00000532322 N/A N/A N/A 0.250±0.00 N/A N/A N/A N/A 0.300±0.00 N/A 0.941±0.00
ENST00000533824 N/A N/A N/A N/A N/A 0.613±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005886 TAS plasma membrane
GO:0006810 IEA transport
GO:0006814 IEA sodium ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055085 TAS:IEA transmembrane transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005518 slc5a9 solute carrier family 5 (sodium/glucose cotransporter), member 9 protein_coding Danio_rerio
ENSMUSG00000028544 Slc5a9 solute carrier family 5 (sodium/glucose cotransporter), member 9 protein_coding Mus_musculus

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