C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collectin sub-family member 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000118004 COLEC11 9606 + 2:3594832-3644644 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000236693 COLEC11-001 3595049-3644458 protein_coding
  ENST00000349077 COLEC11-002 3595092-3644458 protein_coding
  ENST00000382062 COLEC11-201 3594832-3644644 protein_coding
  ENST00000402794 COLEC11-005 3606052-3644446 protein_coding
  ENST00000402922 COLEC11-008 3606052-3644446 protein_coding
  ENST00000403096 COLEC11-007 3605701-3644446 protein_coding
  ENST00000404205 COLEC11-006 3606052-3644446 protein_coding
  ENST00000416132 COLEC11-011 3595154-3644446 nonsense_mediated_decay
  ENST00000418971 COLEC11-202 3601906-3644644 protein_coding
  ENST00000419002 COLEC11-010 3594836-3605040 processed_transcript
  ENST00000438814 COLEC11-009 3601906-3640331 protein_coding
  ENST00000460971 COLEC11-004 3594955-3644446 processed_transcript
  ENST00000487365 COLEC11-003 3594955-3644446 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000349077ENST00000382062ENST00000402794ENST00000402922ENST00000403096ENST00000404205ENST00000416132ENST00000418971ENST00000419002ENST00000438814ENST00000460971ENST00000487365
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000349077 2.342±0.00 7.986±0.00 N/A 0.286±0.00 1.767±0.73 3.343±0.00 2.037±1.22 11.064±7.67 36.818±0.00 N/A N/A 18.393±21.92 4.734±1.29 8.090±0.00
ENST00000382062 N/A N/A N/A N/A N/A N/A N/A 8.472±0.00 N/A N/A N/A 3.888±2.59 N/A 1.046±0.00
ENST00000402794 N/A N/A 2.756±0.00 0.543±0.00 N/A N/A N/A N/A 0.932±0.00 N/A N/A N/A N/A N/A
ENST00000402922 0.504±0.00 N/A 1.669±0.00 N/A 0.640±0.00 N/A N/A 2.652±0.00 N/A N/A N/A N/A 1.856±0.00 2.265±0.00
ENST00000403096 N/A N/A 1.099±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.822±0.00
ENST00000404205 N/A N/A 2.420±0.00 N/A N/A 0.190±0.00 N/A N/A N/A N/A 0.087±0.00 N/A N/A 1.873±0.00
ENST00000416132 N/A N/A N/A N/A N/A N/A N/A N/A 0.686±0.00 N/A N/A N/A 0.419±0.00 0.843±0.00
ENST00000418971 N/A N/A N/A N/A N/A N/A 0.164±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000419002 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.953±0.00 N/A N/A N/A N/A
ENST00000438814 N/A N/A N/A 0.196±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460971 N/A 6.258±0.00 N/A N/A 1.088±0.00 N/A 1.583±0.00 1.274±0.00 N/A 0.915±0.62 0.234±0.00 0.140±0.00 N/A N/A
ENST00000487365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.516±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005537 IEA mannose binding
GO:0005576 TAS extracellular region
GO:0005581 IEA collagen trimer
GO:0007275 IEA multicellular organismal development
GO:0032502 ISS developmental process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013266 colec11 collectin sub-family member 11 protein_coding Danio_rerio
ENSMUSG00000036655 Colec11 collectin sub-family member 11 protein_coding Mus_musculus

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