C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 541
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000118156 ZNF541 9606 - 19:47520685-47555856 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263351 ZNF541-002 47520690-47545300 protein_coding
  ENST00000314121 ZNF541-201 47520691-47555856 protein_coding
  ENST00000391901 ZNF541-001 47520685-47555856 protein_coding
  ENST00000487275 ZNF541-003 47532167-47540969 processed_transcript
  ENST00000595558 ZNF541-004 47521224-47545261 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartLiverLungOvaryPlacentaTestisENST00000263351ENST00000391901ENST00000487275ENST00000595558
Transcript ID Adipose Brain Colon Heart Liver Lung Ovary Placenta Testis
ENST00000263351 0.219±0.00 0.032±0.00 0.087±0.00 0.289±0.00 N/A 0.016±0.00 0.042±0.00 0.221±0.03 N/A
ENST00000391901 N/A 0.063±0.00 N/A N/A N/A 0.014±0.00 0.127±0.01 0.065±0.00 6.268±1.74
ENST00000487275 N/A N/A N/A N/A N/A 0.382±0.00 0.474±0.00 N/A N/A
ENST00000595558 N/A 0.046±0.00 0.102±0.00 N/A 0.009±0.00 0.052±0.00 0.099±0.04 0.077±0.01 2.878±0.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000449 CIL_000449_0002 CGP 19:47487637-47555856

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0030154 IEA cell differentiation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052188 zinc finger protein 541 protein_coding Danio_rerio
ENSMUSG00000078796 Zfp541 zinc finger protein 541 protein_coding Mus_musculus

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