C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transition protein 1 (during histone to protamine replacement)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000118245 TNP1 9606 - 2:216859458-216860064 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000236979 TNP1-001 216859458-216860064 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartTestisENST00000236979
Transcript ID Adipose Adrenal Brain Breast Colon Heart Testis
ENST00000236979 0.437±0.00 2.428±0.00 0.051±0.00 0.234±0.00 0.638±0.00 0.154±0.00 1964.600±35.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MA CIL_0005MA_0001 CGP 2:216672105-216860064

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000012 IDA single strand break repair
GO:0000786 IDA:IEA nucleosome
GO:0001673 IEA male germ cell nucleus
GO:0003677 IMP:IEA DNA binding
GO:0005634 IEA nucleus
GO:0006337 IMP nucleosome disassembly
GO:0006338 IDA chromatin remodeling
GO:0006342 IEP chromatin silencing
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0007286 IDA spermatid development
GO:0007289 TAS spermatid nucleus differentiation
GO:0007290 IMP spermatid nucleus elongation
GO:0019953 IMP sexual reproduction
GO:0030317 IMP sperm motility
GO:0035042 TAS fertilization, exchange of chromosomal proteins
GO:0045892 IDA negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000026182 Tnp1 transition protein 1 protein_coding Mus_musculus

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