C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB3 GTPase activating protein subunit 2 (non-catalytic)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000118873 RAB3GAP2 9606 - 1:220148293-220272454 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000237724 RAB3GAP2-009 220196184-220272414 retained_intron
  ENST00000358951 RAB3GAP2-001 220148293-220272454 protein_coding
  ENST00000462353 RAB3GAP2-007 220265985-220272361 processed_transcript
  ENST00000474178 RAB3GAP2-010 220205907-220272370 nonsense_mediated_decay
  ENST00000474966 RAB3GAP2-006 220151256-220153722 processed_transcript
  ENST00000475769 RAB3GAP2-003 220219435-220272337 processed_transcript
  ENST00000478976 RAB3GAP2-008 220185655-220272430 processed_transcript
  ENST00000484658 RAB3GAP2-011 220202276-220211377 protein_coding
  ENST00000491005 RAB3GAP2-005 220151183-220154060 processed_transcript
  ENST00000491305 RAB3GAP2-004 220151605-220154428 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358951
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358951 3.540±0.00 3.561±0.00 4.694±0.34 3.733±0.05 3.434±0.94 2.096±1.04 2.818±0.28 2.635±1.89 2.191±1.07 1.156±0.40 2.760±1.36 2.315±0.96 2.674±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000123 CIL_000123_0002 CGP 1:220094102-220272454

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006886 TAS intracellular protein transport
GO:0008047 TAS enzyme activator activity
GO:0017112 IMP Rab guanyl-nucleotide exchange factor activity
GO:0017137 IPI Rab GTPase binding
GO:0030234 ISS enzyme regulator activity
GO:0032851 IMP positive regulation of Rab GTPase activity
GO:0043085 TAS positive regulation of catalytic activity
GO:0043087 ISS regulation of GTPase activity
GO:0043234 IDA protein complex
GO:0043547 TAS positive regulation of GTPase activity
GO:0046982 ISS protein heterodimerization activity
GO:0097051 IMP establishment of protein localization to endoplasmic reticulum membrane
GO:1903373 IMP positive regulation of endoplasmic reticulum tubular network organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044136 rab3gap2 RAB3 GTPase activating protein subunit 2 (non-catalytic) protein_coding Danio_rerio
ENSMUSG00000039318 Rab3gap2 RAB3 GTPase activating protein subunit 2 protein_coding Mus_musculus

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