C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: intraflagellar transport 43
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000119650 IFT43 9606 + 14:75902136-76084585 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000238628 IFT43-004 75985782-76083746 protein_coding
  ENST00000314067 IFT43-201 75985753-76083749 protein_coding
  ENST00000542766 IFT43-001 75985770-76084073 nonsense_mediated_decay
  ENST00000553338 IFT43-008 75985794-76022402 processed_transcript
  ENST00000553438 IFT43-009 76022325-76082625 processed_transcript
  ENST00000554026 IFT43-002 75985780-76083701 retained_intron
  ENST00000554233 IFT43-012 76058324-76059610 retained_intron
  ENST00000554423 IFT43-011 76058171-76059348 retained_intron
  ENST00000555305 IFT43-003 75985780-76084585 retained_intron
  ENST00000555370 IFT43-007 75985782-76059376 nonsense_mediated_decay
  ENST00000555677 IFT43-006 75902136-76022631 retained_intron
  ENST00000556742 IFT43-005 75985784-76059271 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000314067ENST00000554026
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000314067 8.716±0.00 15.976±0.00 15.902±0.00 11.259±0.00 5.330±2.31 18.070±0.00 6.678±0.00 22.299±0.00 N/A 25.582±6.17 17.780±0.00
ENST00000554026 N/A N/A N/A N/A N/A N/A N/A N/A 3.434±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005815 IDA microtubule organizing center
GO:0015630 IDA microtubule cytoskeleton
GO:0030991 IDA intraciliary transport particle A
GO:0035721 IMP intraciliary retrograde transport
GO:0060271 IMP cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087273 IFT43 intraflagellar transport 43 protein_coding Danio_rerio
ENSMUSG00000007867 Ift43 intraflagellar transport 43 protein_coding Mus_musculus

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