C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 10 open reading frame 88
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000119965 C10orf88 9606 - 10:122930903-122954403 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000368891 C10orf88-002 122930903-122954311 processed_transcript
  ENST00000462191 C10orf88-004 122932409-122933459 processed_transcript
  ENST00000470158 C10orf88-003 122932603-122952007 processed_transcript
  ENST00000481909 C10orf88-001 122931508-122954403 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000368891ENST00000481909
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000368891 1.444±0.00 2.322±0.00 1.877±1.05 N/A N/A N/A N/A 0.789±0.00 1.309±0.00 1.721±0.01 0.986±0.26 3.458±0.00
ENST00000481909 N/A N/A 1.218±0.00 1.671±0.00 1.302±0.00 1.484±0.00 0.660±0.00 0.765±0.00 N/A 3.441±0.00 1.296±0.00 5.940±0.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DB CIL_0008DB_0001 VISTA 10:122767938-123370218
CIL_0009A3 CIL_0009A3_0001 VISTA 10:122792297-123393555
CIL_0007QE CIL_0007QE_0001 VISTA 10:122843411-123445122
CIL_0001B9 CIL_0001B9_0001 CGP 10:122910701-122954403
CIL_0002JF CIL_0002JF_0001 CGP 10:122930903-122997513

Gene Ontology
GO IDEvidence TypeGO Description
GO:0042802 IEA identical protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089828 C12H10orf88 chromosome 10 open reading frame 88 protein_coding Danio_rerio
ENSMUSG00000040177 2310057M21Rik RIKEN cDNA 2310057M21 gene protein_coding Mus_musculus

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