C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: t-complex 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000120438 TCP1 9606 - 6:159778498-159789749 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000321394 TCP1-001 159778498-159789749 protein_coding
  ENST00000392168 TCP1-004 159778987-159789703 protein_coding
  ENST00000420894 TCP1-006 159778985-159789572 protein_coding
  ENST00000467544 TCP1-002 159784676-159785871 retained_intron
  ENST00000536394 TCP1-014 159785937-159788868 protein_coding
  ENST00000536607 TCP1-013 159787744-159789576 retained_intron
  ENST00000536807 TCP1-017 159781025-159785325 retained_intron
  ENST00000537390 TCP1-007 159785474-159789672 protein_coding
  ENST00000538128 TCP1-008 159784799-159789672 protein_coding
  ENST00000538530 TCP1-012 159783990-159789584 nonsense_mediated_decay
  ENST00000539756 TCP1-011 159779916-159789585 protein_coding
  ENST00000539948 TCP1-015 159785400-159788439 protein_coding
  ENST00000543517 TCP1-010 159784811-159789602 nonsense_mediated_decay
  ENST00000543532 TCP1-009 159783990-159789672 processed_transcript
  ENST00000544255 TCP1-005 159778964-159789596 protein_coding
  ENST00000545764 TCP1-016 159785418-159788274 retained_intron
  ENST00000546023 TCP1-003 159788437-159789673 processed_transcript
  ENST00000546204 TCP1-018 159779592-159780261 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverOvaryPlacentaTestisENST00000321394ENST00000392168ENST00000539756
Transcript ID Bladder Brain Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000321394 11.028±0.00 52.156±10.76 25.177±0.00 16.837±0.00 39.826±0.00 52.775±0.00 96.708±48.30 27.202±8.01 66.046±8.15
ENST00000392168 N/A N/A N/A N/A N/A N/A 71.059±0.00 33.406±2.80 79.241±0.00
ENST00000539756 N/A N/A N/A N/A N/A N/A N/A 68.990±0.00 161.184±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089P CIL_00089P_0001 VISTA 6:159654795-160257694

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000242 IEA pericentriolar material
GO:0000792 IEA heterochromatin
GO:0001669 IEA acrosomal vesicle
GO:0002199 IEA zona pellucida receptor complex
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005720 IEA nuclear heterochromatin
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005813 IDA centrosome
GO:0005815 IEA microtubule organizing center
GO:0005829 TAS cytosol
GO:0005832 IEA chaperonin-containing T-complex
GO:0005874 IDA microtubule
GO:0006457 IEA:TAS protein folding
GO:0007021 NAS tubulin complex assembly
GO:0007339 IEA binding of sperm to zona pellucida
GO:0044053 IEA translocation of peptides or proteins into host cell cytoplasm
GO:0044267 IEA:TAS cellular protein metabolic process
GO:0044297 IEA cell body
GO:0044822 IDA poly(A) RNA binding
GO:0051082 IEA unfolded protein binding
GO:0051084 TAS 'de novo' posttranslational protein folding
GO:0070062 IDA extracellular vesicular exosome
GO:1901998 IEA toxin transport
GO:2000109 IEA regulation of macrophage apoptotic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017891 tcp1 t-complex polypeptide 1 protein_coding Danio_rerio
ENSMUSG00000068039 Tcp1 t-complex protein 1 protein_coding Mus_musculus

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