C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sorting nexin 19
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000120451 SNX19 9606 - 11:130875436-130916509 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265909 SNX19-001 130875436-130916509 protein_coding
  ENST00000426933 SNX19-009 130878051-130893874 protein_coding
  ENST00000524460 SNX19-013 130901811-130910371 processed_transcript
  ENST00000526579 SNX19-015 130877913-130905999 processed_transcript
  ENST00000527116 SNX19-016 130877840-130881141 retained_intron
  ENST00000527451 SNX19-012 130903069-130906134 retained_intron
  ENST00000528555 SNX19-002 130878393-130916451 protein_coding
  ENST00000530330 SNX19-008 130878257-130893059 processed_transcript
  ENST00000530356 SNX19-006 130878393-130916451 protein_coding
  ENST00000531608 SNX19-010 130910308-130916479 retained_intron
  ENST00000533214 SNX19-005 130905655-130916449 protein_coding
  ENST00000533318 SNX19-003 130878196-130916444 processed_transcript
  ENST00000534726 SNX19-007 130877958-130908346 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000265909ENST00000533214
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000265909 3.921±0.00 4.320±0.00 3.622±0.00 6.959±0.00 4.366±1.38 1.397±0.00 1.817±0.74 2.678±0.60 2.896±0.00 4.087±0.00 7.397±5.23 3.519±1.88 6.990±4.07
ENST00000533214 N/A N/A N/A N/A N/A N/A 4.048±0.00 N/A N/A N/A 4.146±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0035091 IEA phosphatidylinositol binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061101 snx19a sorting nexin 19a protein_coding Danio_rerio
ENSDARG00000079931 snx19b sorting nexin 19b protein_coding Danio_rerio
ENSMUSG00000031993 Snx19 sorting nexin 19 protein_coding Mus_musculus

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