C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SIL1 nucleotide exchange factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000120725 SIL1 9606 - 5:138946720-139293557 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265195 SIL1-002 138946754-139198316 protein_coding
  ENST00000394817 SIL1-001 138946720-139198398 protein_coding
  ENST00000440765 SIL1-006 139187751-139198308 processed_transcript
  ENST00000503732 SIL1-012 138951789-139093881 processed_transcript
  ENST00000504666 SIL1-009 139108007-139196528 processed_transcript
  ENST00000505353 SIL1-007 139051007-139155467 protein_coding
  ENST00000505830 SIL1-011 139050950-139198304 protein_coding
  ENST00000505945 SIL1-004 138951820-139042682 protein_coding
  ENST00000507002 SIL1-010 139050946-139198297 protein_coding
  ENST00000508639 SIL1-005 139026957-139198306 protein_coding
  ENST00000508744 SIL1-015 139273538-139293557 processed_transcript
  ENST00000509400 SIL1-014 139121035-139293534 processed_transcript
  ENST00000509534 SIL1-003 138947023-139196521 protein_coding
  ENST00000513453 SIL1-008 139042703-139131758 protein_coding
  ENST00000515008 SIL1-013 138946995-138953433 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverMusclePlacentaENST00000394817
Transcript ID Heart Kidney Liver Muscle Placenta
ENST00000394817 10.649±0.00 18.727±0.00 39.576±0.00 6.107±0.00 24.249±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005D1 CIL_0005D1_0001 CGP 5:138868923-139293557

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005615 IDA extracellular space
GO:0005783 NAS endoplasmic reticulum
GO:0006457 NAS protein folding
GO:0006886 NAS intracellular protein transport
GO:0051082 NAS unfolded protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000024357 Sil1 endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae) protein_coding Mus_musculus

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