C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thymopoietin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000120802 TMPO 9606 + 12:98515512-98550379 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261210 TMPO-006 98515852-98537713 protein_coding
  ENST00000266732 TMPO-001 98515630-98535634 protein_coding
  ENST00000343315 TMPO-014 98515618-98548828 protein_coding
  ENST00000393053 TMPO-005 98515631-98548957 protein_coding
  ENST00000546828 TMPO-013 98515632-98531779 processed_transcript
  ENST00000547214 TMPO-007 98527885-98532272 processed_transcript
  ENST00000548223 TMPO-010 98544202-98547864 processed_transcript
  ENST00000548911 TMPO-012 98515579-98528013 processed_transcript
  ENST00000549938 TMPO-009 98516252-98532966 processed_transcript
  ENST00000551987 TMPO-011 98544639-98547787 retained_intron
  ENST00000552831 TMPO-008 98527529-98537574 retained_intron
  ENST00000556029 TMPO-002 98515512-98550379 protein_coding
  ENST00000556678 TMPO-015 98527886-98547701 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261210ENST00000266732ENST00000548223ENST00000548911ENST00000556029
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261210 N/A N/A N/A N/A N/A N/A N/A 7.514±0.00 N/A N/A N/A N/A N/A N/A
ENST00000266732 1.347±0.00 N/A 1.638±0.00 1.589±0.10 1.173±0.00 3.762±1.47 0.859±0.00 3.754±0.00 1.764±0.31 3.015±0.44 0.330±0.18 8.401±3.17 4.317±2.02 7.330±0.21
ENST00000548223 N/A N/A N/A N/A N/A N/A N/A N/A 4.798±0.00 N/A N/A N/A N/A N/A
ENST00000548911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 106.417±0.00
ENST00000556029 4.406±0.00 13.318±0.00 N/A 2.448±0.93 5.099±1.52 2.773±1.67 1.297±0.68 4.560±0.00 4.494±0.00 6.313±2.58 1.448±1.37 13.772±2.22 7.164±2.27 8.003±4.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090D CIL_00090D_0001 VISTA 12:98189717-98793261
CIL_0000VM CIL_0000VM_0002 CGP 12:98515512-98606379

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000785 IDA chromatin
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005521 TAS lamin binding
GO:0005634 TAS nucleus
GO:0005635 TAS nuclear envelope
GO:0005637 IEA nuclear inner membrane
GO:0005737 IEA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0031965 IDA nuclear membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007315 tmpoa thymopoietin a protein_coding Danio_rerio
ENSDARG00000022978 tmpob thymopoietin b protein_coding Danio_rerio
ENSMUSG00000019961 Tmpo thymopoietin protein_coding Mus_musculus

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