C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: developmental pluripotency associated 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000121570 DPPA4 9606 - 3:109326141-109337572 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000335658 DPPA4-001 109326141-109337572 protein_coding
  ENST00000463966 DPPA4-002 109327525-109337522 processed_transcript
  ENST00000475135 DPPA4-004 109326853-109330760 retained_intron
  ENST00000477303 DPPA4-005 109331947-109336431 protein_coding
  ENST00000478791 DPPA4-003 109329976-109337515 processed_transcript
  ENST00000487299 DPPA4-008 109329018-109332190 retained_intron
  ENST00000489281 DPPA4-006 109333396-109337545 retained_intron
  ENST00000495679 DPPA4-007 109328890-109337517 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000335658ENST00000475135ENST00000478791ENST00000489281
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000335658 N/A N/A N/A 0.029±0.00 N/A N/A N/A 0.052±0.00 0.040±0.00 N/A N/A N/A 0.078±0.00 1.651±0.00
ENST00000475135 0.120±0.00 0.363±0.00 0.042±0.00 0.144±0.00 0.173±0.00 0.167±0.00 0.071±0.00 0.093±0.00 0.107±0.00 0.127±0.00 0.061±0.00 0.029±0.01 0.134±0.07 0.704±0.00
ENST00000478791 0.182±0.00 0.392±0.00 N/A 0.328±0.00 0.475±0.00 0.413±0.00 0.337±0.00 0.289±0.00 0.228±0.00 0.590±0.00 0.183±0.00 0.054±0.04 N/A N/A
ENST00000489281 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.098±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0060484 IEA lung-associated mesenchyme development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000058550 Dppa4 developmental pluripotency associated 4 protein_coding Mus_musculus

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