C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEP domain containing 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000121690 DEPDC7 9606 + 11:33015864-33033582 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000241051 DEPDC7-001 33015864-33033582 protein_coding
  ENST00000311388 DEPDC7-002 33016164-33033582 protein_coding
  ENST00000427755 DEPDC7-004 33015876-33026717 retained_intron
  ENST00000532078 DEPDC7-005 33015911-33028294 retained_intron
  ENST00000616885 DEPDC7-201 33016182-33033578 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000241051ENST00000427755ENST00000532078ENST00000616885
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000241051 0.099±0.00 0.182±0.00 1.297±0.00 0.176±0.10 0.182±0.00 0.941±0.22 0.115±0.01 2.163±0.59 7.947±7.67 0.133±0.09 0.680±0.61 1.555±1.37 0.779±0.29 8.416±3.68
ENST00000427755 N/A N/A N/A 0.133±0.00 0.105±0.00 N/A N/A N/A N/A 0.066±0.00 N/A N/A N/A N/A
ENST00000532078 N/A 0.112±0.00 1.130±0.00 0.563±0.00 0.066±0.00 N/A 0.053±0.00 N/A N/A 0.389±0.00 N/A 0.560±0.00 N/A N/A
ENST00000616885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.559±5.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SB CIL_0008SB_0001 VISTA 11:32486574-33087503
CIL_0003LQ CIL_0003LQ_0002 CGP 11:32893178-33033582

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005829 TAS cytosol
GO:0007264 TAS small GTPase mediated signal transduction
GO:0008150 ND biological_process
GO:0035556 IEA intracellular signal transduction
GO:0051056 TAS regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053246 DEPDC7 (1 of 2) DEP domain containing 7 protein_coding Danio_rerio
ENSDARG00000055043 depdc7 DEP domain containing 7 protein_coding Danio_rerio
ENSMUSG00000027173 Depdc7 DEP domain containing 7 protein_coding Mus_musculus

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