C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBC1 domain family, member 15
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000121749 TBC1D15 9606 + 12:71839707-71927248 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000319106 TBC1D15-013 71839759-71923223 protein_coding
  ENST00000460818 TBC1D15-009 71868802-71884981 processed_transcript
  ENST00000462788 TBC1D15-003 71839759-71923362 nonsense_mediated_decay
  ENST00000468049 TBC1D15-014 71839763-71894722 nonsense_mediated_decay
  ENST00000472611 TBC1D15-007 71839759-71894784 nonsense_mediated_decay
  ENST00000474468 TBC1D15-006 71839759-71893306 processed_transcript
  ENST00000479971 TBC1D15-012 71897847-71907762 retained_intron
  ENST00000482439 TBC1D15-005 71839707-71893324 protein_coding
  ENST00000483828 TBC1D15-011 71896388-71917775 retained_intron
  ENST00000485960 TBC1D15-002 71839759-71923645 protein_coding
  ENST00000491063 TBC1D15-004 71839759-71897889 protein_coding
  ENST00000498482 TBC1D15-010 71839759-71884901 nonsense_mediated_decay
  ENST00000546450 TBC1D15-018 71913360-71923215 retained_intron
  ENST00000546932 TBC1D15-015 71839778-71884938 processed_transcript
  ENST00000548679 TBC1D15-017 71897217-71918497 processed_transcript
  ENST00000549402 TBC1D15-016 71839759-71894379 processed_transcript
  ENST00000550746 TBC1D15-001 71839718-71927248 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000319106ENST00000462788ENST00000474468ENST00000485960ENST00000491063ENST00000546450ENST00000550746
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000319106 N/A N/A N/A 1.526±0.00 N/A N/A 1.577±0.00 1.769±0.00 N/A N/A 5.932±0.00 N/A N/A N/A
ENST00000462788 10.992±0.00 8.492±0.00 0.555±0.00 3.678±2.47 7.696±0.00 7.208±0.00 1.716±0.00 3.383±0.00 1.782±0.00 9.250±0.00 2.778±0.00 4.792±3.13 6.439±5.62 26.783±10.01
ENST00000474468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.837±0.00 N/A N/A N/A
ENST00000485960 8.106±0.00 7.730±0.00 0.946±0.00 4.647±0.00 5.134±1.36 3.733±2.23 2.003±1.33 5.967±0.00 2.690±1.09 10.276±5.89 2.931±2.65 4.672±1.67 3.420±0.01 5.901±0.00
ENST00000491063 N/A N/A N/A N/A N/A N/A N/A 2.340±0.00 2.333±0.00 N/A N/A 6.676±0.00 8.862±0.00 21.261±0.00
ENST00000546450 N/A N/A 1.425±0.00 N/A N/A N/A N/A 1.945±0.00 2.833±0.00 3.274±0.00 0.884±0.00 N/A N/A N/A
ENST00000550746 N/A N/A N/A 2.366±0.00 1.279±0.55 1.691±0.00 0.852±0.00 0.999±0.59 N/A 1.317±0.67 0.794±0.00 0.817±0.00 0.957±0.03 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005097 IEA:ISS Rab GTPase activator activity
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0005737 ISS cytoplasm
GO:0005739 IEA mitochondrion
GO:0032313 ISS:IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057218 tbc1d15 TBC1 domain family, member 15 protein_coding Danio_rerio
ENSMUSG00000020130 Tbc1d15 TBC1 domain family, member 15 protein_coding Mus_musculus

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