C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SLIT and NTRK-like family, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000121871 SLITRK3 9606 - 3:165186720-165197109 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000241274 SLITRK3-001 165186722-165196852 protein_coding
  ENST00000475390 SLITRK3-002 165186720-165196002 protein_coding
  ENST00000497724 SLITRK3-003 165190343-165197109 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000241274ENST00000475390ENST00000497724
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000241274 0.003±0.00 N/A 0.679±0.21 0.116±0.11 0.241±0.00 0.007±0.00 0.017±0.00 2.678±0.00 0.023±0.00 0.616±0.00 0.132±0.00
ENST00000475390 N/A 0.023±0.00 2.295±0.46 N/A 0.440±0.02 N/A 0.190±0.00 1.072±0.72 N/A 0.373±0.09 0.188±0.04
ENST00000497724 N/A N/A N/A N/A N/A N/A N/A N/A 0.335±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZF CIL_0001ZF_0001 CGP 3:164978898-165197109
CIL_0001ZC CIL_0001ZC_0001 CGP 3:165186720-165837472

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0007409 IEA axonogenesis
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074739 slitrk3b SLIT and NTRK-like family, member 3b protein_coding Danio_rerio
ENSDARG00000078123 SLITRK3 (2 of 2) SLIT and NTRK-like family, member 3 protein_coding Danio_rerio
ENSMUSG00000048304 Slitrk3 SLIT and NTRK-like family, member 3 protein_coding Mus_musculus

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