C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger and SCAN domain containing 20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000121903 ZSCAN20 9606 + 1:33472645-33496507 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000361328 ZSCAN20-004 33472645-33496507 protein_coding
  ENST00000373413 ZSCAN20-002 33472651-33492636 protein_coding
  ENST00000480917 ZSCAN20-003 33472660-33489245 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361328ENST00000373413ENST00000480917
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361328 0.166±0.00 0.412±0.00 0.345±0.20 0.408±0.06 0.127±0.05 0.117±0.06 0.100±0.00 0.156±0.05 0.059±0.00 0.295±0.14 0.357±0.04 0.465±0.00
ENST00000373413 N/A 0.272±0.00 N/A N/A 0.131±0.00 0.198±0.00 N/A 0.077±0.00 N/A 0.163±0.00 N/A N/A
ENST00000480917 N/A N/A N/A N/A N/A N/A 1.724±0.00 N/A N/A N/A N/A 1.055±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097K CIL_00097K_0001 VISTA 1:32956893-33558359
CIL_0008F1 CIL_0008F1_0001 VISTA 1:33063188-33665346

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000094859 si:dkey-11o15.10 si:dkey-11o15.10 protein_coding Danio_rerio
ENSDARG00000097059 si:dkey-159n16.4 si:dkey-159n16.4 protein_coding Danio_rerio
ENSDARG00000097776 protein_coding Danio_rerio
ENSMUSG00000061894 Zscan20 zinc finger and SCAN domains 20 protein_coding Mus_musculus

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