C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polymerase (DNA directed) kappa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000122008 POLK 9606 + 5:75511756-75601144 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000241436 POLK-001 75511756-75601144 protein_coding
  ENST00000502567 POLK-017 75597417-75597988 retained_intron
  ENST00000503479 POLK-013 75511845-75598040 nonsense_mediated_decay
  ENST00000504026 POLK-007 75547023-75598018 protein_coding
  ENST00000505069 POLK-016 75597114-75598040 retained_intron
  ENST00000505774 POLK-014 75512065-75569369 nonsense_mediated_decay
  ENST00000505975 POLK-010 75547023-75598018 nonsense_mediated_decay
  ENST00000506928 POLK-003 75511891-75599102 processed_transcript
  ENST00000507073 POLK-015 75552471-75576917 processed_transcript
  ENST00000508526 POLK-011 75547023-75598018 protein_coding
  ENST00000508867 POLK-005 75547010-75582965 retained_intron
  ENST00000509126 POLK-012 75547023-75598018 nonsense_mediated_decay
  ENST00000510815 POLK-009 75511891-75598167 nonsense_mediated_decay
  ENST00000511527 POLK-008 75547023-75598014 nonsense_mediated_decay
  ENST00000514141 POLK-006 75547010-75599834 nonsense_mediated_decay
  ENST00000514296 POLK-002 75512069-75573837 protein_coding
  ENST00000515295 POLK-004 75547010-75590509 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000241436ENST00000503479ENST00000505975ENST00000506928ENST00000514141
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000241436 0.733±0.00 N/A N/A N/A 1.120±0.43 1.746±0.92 1.390±0.00 2.001±0.00 N/A 1.399±0.52 1.132±0.25
ENST00000503479 1.716±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505975 N/A N/A N/A N/A N/A N/A N/A N/A 0.828±0.00 N/A N/A
ENST00000506928 2.103±0.00 1.549±0.00 3.060±0.00 2.540±0.00 1.559±0.00 2.062±0.00 3.352±0.00 4.710±0.00 N/A 3.195±0.00 N/A
ENST00000514141 N/A N/A N/A N/A N/A N/A 0.988±0.00 N/A N/A 1.406±0.00 0.973±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000776 CIL_000776_0002 CGP 5:75511756-75671846

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003684 IEA damaged DNA binding
GO:0003887 IEA DNA-directed DNA polymerase activity
GO:0005634 IDA nucleus
GO:0006260 IEA DNA replication
GO:0006281 TAS:IEA DNA repair
GO:0006297 IMP nucleotide-excision repair, DNA gap filling
GO:0046872 IEA metal ion binding
GO:0071897 IEA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059963 polk polymerase (DNA directed) kappa protein_coding Danio_rerio
ENSMUSG00000021668 Polk polymerase (DNA directed), kappa protein_coding Mus_musculus

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