C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000122674 CCZ1 9606 + 7:5898725-5925974 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000325974 CCZ1-001 5898734-5925974 protein_coding
  ENST00000461592 CCZ1-004 5898725-5900633 retained_intron
  ENST00000474507 CCZ1-002 5917726-5925970 retained_intron
  ENST00000478672 CCZ1-003 5898781-5902297 retained_intron
  ENST00000483394 CCZ1-005 5902596-5910236 retained_intron
  ENST00000496860 CCZ1-006 5924741-5925940 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000325974ENST00000474507ENST00000478672ENST00000483394
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000325974 0.320±0.00 N/A N/A 0.493±0.05 0.877±0.49 0.489±0.26 0.585±0.11 0.609±0.01 0.611±0.18 0.376±0.04 0.713±0.27 2.842±0.12 1.516±0.39 1.039±0.51
ENST00000474507 N/A N/A N/A 0.553±0.00 N/A N/A 0.138±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000478672 0.376±0.00 1.714±0.00 0.539±0.00 0.830±0.15 0.841±0.00 1.388±0.00 0.249±0.02 0.589±0.10 0.508±0.41 1.220±0.00 0.347±0.00 1.233±0.46 N/A N/A
ENST00000483394 N/A N/A N/A N/A N/A 0.589±0.00 N/A N/A N/A 0.937±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000854 CIL_000854_0001 VISTA 7:5332287-5936913

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005764 IEA lysosome
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056559 ccz1 CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000029617 Ccz1 CCZ1 vacuolar protein trafficking and biogenesis associated protein_coding Mus_musculus

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