C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: FtsJ RNA methyltransferase homolog 2 (E. coli)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000122687 FTSJ2 9606 - 7:2234231-2242198 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000242257 FTSJ2-001 2234291-2242198 protein_coding
  ENST00000407040 FTSJ2-004 2235047-2239244 protein_coding
  ENST00000440306 FTSJ2-201 2234293-2241303 protein_coding
  ENST00000467199 FTSJ2-002 2234231-2242169 processed_transcript
  ENST00000486040 FTSJ2-003 2234295-2242189 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000242257ENST00000407040ENST00000440306ENST00000467199ENST00000486040
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000242257 N/A 6.486±0.00 0.112±0.00 3.107±1.58 4.052±3.58 2.776±1.18 0.696±0.52 2.169±0.00 2.619±2.02 1.438±0.00 5.202±0.00 5.911±2.78 19.399±0.00 3.096±0.71
ENST00000407040 N/A N/A 0.773±0.00 N/A N/A N/A 0.712±0.00 N/A N/A N/A N/A 2.616±0.00 N/A N/A
ENST00000440306 4.267±0.00 3.141±0.00 N/A N/A N/A N/A 3.342±0.00 6.401±0.00 N/A 1.210±0.33 N/A 3.072±0.00 6.479±1.67 8.072±0.75
ENST00000467199 0.840±0.00 N/A N/A 4.157±0.00 1.149±0.55 2.121±0.00 N/A N/A N/A 0.974±0.00 N/A 4.131±1.93 3.149±0.00 4.544±0.00
ENST00000486040 1.397±0.00 4.407±0.00 0.610±0.00 1.959±0.32 1.720±0.34 0.965±0.14 0.447±0.02 1.249±0.65 0.466±0.26 0.275±0.00 1.604±0.00 2.855±0.69 2.452±0.53 1.410±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ZQ CIL_0000ZQ_0001 CGP 7:1815793-2242198
CIL_0000ZN CIL_0000ZN_0001 CGP 7:2234231-2251146

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001510 IEA RNA methylation
GO:0005730 IDA nucleolus
GO:0005739 ISS mitochondrion
GO:0006364 NAS rRNA processing
GO:0008168 IEA methyltransferase activity
GO:0008283 NAS cell proliferation
GO:0008650 NAS rRNA (uridine-2'-O-)-methyltransferase activity
GO:0031167 NAS rRNA methylation
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075368 FTSJ2 FtsJ RNA methyltransferase homolog 2 (E. coli) protein_coding Danio_rerio
ENSMUSG00000029557 Ftsj2 FtsJ homolog 2 (E. coli) protein_coding Mus_musculus

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