C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neurogenin 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000122859 NEUROG3 9606 - 10:69571698-69573238 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000242462 NEUROG3-001 69571698-69573238 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartMuscleENST00000242462
Transcript ID Adipose Adrenal Brain Colon Heart Muscle
ENST00000242462 0.025±0.00 0.322±0.00 0.142±0.00 0.253±0.19 0.080±0.00 0.024±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TI CIL_0007TI_0001 VISTA 10:69276019-69878973

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001047 ISS core promoter binding
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001078 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003690 IEA double-stranded DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003713 ISS transcription coactivator activity
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0007399 TAS nervous system development
GO:0007417 TAS central nervous system development
GO:0007422 TAS peripheral nervous system development
GO:0021510 IEA spinal cord development
GO:0030855 IEA epithelial cell differentiation
GO:0030900 IEA forebrain development
GO:0030902 IEA hindbrain development
GO:0031018 TAS endocrine pancreas development
GO:0031490 ISS chromatin DNA binding
GO:0045597 IEA positive regulation of cell differentiation
GO:0045666 IEA positive regulation of neuron differentiation
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046983 IEA protein dimerization activity
GO:0048814 IEA regulation of dendrite morphogenesis
GO:0051091 ISS positive regulation of sequence-specific DNA binding transcription factor activity
GO:0060290 ISS transdifferentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000044312 Neurog3 neurogenin 3 protein_coding Mus_musculus

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