C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: homeobox C12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000123407 HOXC12 9606 + 12:53954834-53958956 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000243103 HOXC12-001 53954834-53958956 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartMuscleOvaryPlacentaTestisENST00000243103
Transcript ID Adipose Adrenal Breast Heart Muscle Ovary Placenta Testis
ENST00000243103 0.941±0.00 1.156±0.00 0.167±0.00 0.084±0.00 0.019±0.00 0.542±0.61 0.136±0.11 0.132±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B4 CIL_0009B4_0001 VISTA 12:53396852-53997557
CIL_0007SU CIL_0007SU_0001 VISTA 12:53718454-54321661
CIL_00084M CIL_00084M_0001 VISTA 12:53732854-54334005
CIL_0002TP CIL_0002TP_0002 CGP 12:53938765-53958956
CIL_0002TO CIL_0002TO_0002 CGP 12:53954834-53977643

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000046043 hoxc12b homeo box C12b protein_coding Danio_rerio
ENSDARG00000070352 hoxc12a homeo box C12a protein_coding Danio_rerio
ENSMUSG00000050328 Hoxc12 homeobox C12 protein_coding Mus_musculus

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