C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: N-myc (and STAT) interactor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000123609 NMI 9606 - 2:151270465-151290057 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000243346 NMI-001 151270465-151290057 protein_coding
  ENST00000414946 NMI-003 151282039-151289894 protein_coding
  ENST00000477072 NMI-004 151282771-151289863 retained_intron
  ENST00000491771 NMI-002 151277255-151289863 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000243346ENST00000477072ENST00000491771
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000243346 6.596±0.00 11.475±0.00 0.448±0.00 0.741±0.46 5.217±2.72 8.914±0.00 0.947±0.77 2.631±2.09 3.003±1.92 3.949±2.45 1.220±0.00 7.345±3.76 13.627±4.51 4.113±2.07
ENST00000477072 N/A N/A N/A N/A N/A N/A 1.148±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000491771 N/A N/A 0.264±0.00 0.083±0.00 N/A N/A 0.111±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007E2 CIL_0007E2_0001 CGP 2:151247940-151290057
CIL_0007E1 CIL_0007E1_0001 CGP 2:151270465-151380048

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003712 TAS transcription cofactor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006954 TAS inflammatory response
GO:0007259 TAS JAK-STAT cascade
GO:2001141 TAS regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060456 NMI N-myc (and STAT) interactor protein_coding Danio_rerio
ENSMUSG00000026946 Nmi N-myc (and STAT) interactor protein_coding Mus_musculus

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