C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 114
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000124226 RNF114 9606 + 20:49936336-49953892 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000244061 RNF114-001 49936348-49953892 protein_coding
  ENST00000622920 RNF114-004 49936407-49952899 protein_coding
  ENST00000622999 RNF114-002 49936377-49953878 nonsense_mediated_decay
  ENST00000623528 RNF114-006 49936336-49952152 nonsense_mediated_decay
  ENST00000623732 RNF114-008 49936399-49946178 nonsense_mediated_decay
  ENST00000624620 RNF114-007 49936399-49941971 retained_intron
  ENST00000624666 RNF114-005 49943931-49952300 retained_intron
  ENST00000625177 RNF114-009 49936399-49952128 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000244061ENST00000622920ENST00000622999ENST00000623528ENST00000624620ENST00000624666ENST00000625177
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000244061 11.277±0.00 16.951±0.00 3.390±0.00 8.464±4.07 8.340±0.01 10.855±3.45 5.942±3.96 11.147±7.05 7.762±2.78 10.813±5.46 8.051±4.85 13.294±6.95 17.100±8.90 17.326±5.15
ENST00000622920 N/A N/A N/A N/A N/A N/A 1.864±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000622999 N/A N/A N/A N/A 6.141±0.00 N/A 3.726±0.00 12.869±0.00 N/A N/A N/A 10.326±2.32 5.341±0.00 N/A
ENST00000623528 10.535±0.00 N/A N/A 9.380±5.37 N/A N/A 2.013±0.00 N/A 12.108±0.00 41.667±0.00 22.944±0.00 15.966±0.00 10.674±2.95 78.797±4.25
ENST00000624620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.904±0.00 N/A N/A
ENST00000624666 N/A 3.857±0.00 N/A N/A 4.309±0.00 1.550±0.00 N/A N/A 1.755±0.00 3.162±1.50 N/A 1.979±0.00 N/A N/A
ENST00000625177 11.766±0.00 N/A 6.578±0.00 N/A N/A N/A N/A 7.002±0.00 N/A N/A 7.959±0.00 N/A N/A 42.177±16.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I4 CIL_0008I4_0001 VISTA 20:49375075-49977641
CIL_00087E CIL_00087E_0001 VISTA 20:49719805-50323644
CIL_00027D CIL_00027D_0001 CGP 20:49903391-49953892
CIL_0006FM CIL_0006FM_0001 CGP 20:49936336-49988886

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IDA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030154 IEA cell differentiation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009886 rnf114 ring finger protein 114 protein_coding Danio_rerio
ENSMUSG00000006418 Rnf114 ring finger protein 114 protein_coding Mus_musculus

Loading