C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histone cluster 1, H2bj
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000124635 HIST1H2BJ 9606 - 6:27125897-27132750 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000339812 HIST1H2BJ-003 27132370-27132750 protein_coding
  ENST00000606923 HIST1H2BJ-002 27126079-27132548 protein_coding
  ENST00000607124 HIST1H2BJ-001 27125897-27132750 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000339812ENST00000606923ENST00000607124
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000339812 N/A 0.970±0.00 0.474±0.00 1.221±1.04 9.000±8.80 42.915±0.00 1.482±0.11 4.033±0.00 5.773±3.38 5.192±2.00 N/A 11.458±15.54 0.380±0.18 N/A
ENST00000606923 0.224±0.00 0.192±0.00 N/A N/A 0.165±0.00 0.787±0.00 1.203±0.00 0.766±0.00 0.651±0.00 2.429±0.00 1.050±0.06 0.412±0.25 0.304±0.16 8.008±0.00
ENST00000607124 0.332±0.00 0.166±0.00 N/A 0.230±0.00 0.084±0.00 0.518±0.00 0.178±0.00 N/A N/A 0.345±0.04 0.547±0.00 0.196±0.11 0.354±0.04 1.827±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096D CIL_00096D_0001 VISTA 6:27032592-27634418
CIL_0000UC CIL_0000UC_0003 CGP 6:27125897-27135291

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000786 NAS:IEA nucleosome
GO:0002227 IDA innate immune response in mucosa
GO:0003677 NAS:IEA DNA binding
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006334 NAS nucleosome assembly
GO:0019731 IDA antibacterial humoral response
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity
GO:0050830 IDA defense response to Gram-positive bacterium

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034203 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000051726 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000051778 zgc:194989 zgc:194989 protein_coding Danio_rerio
ENSDARG00000068996 hist2h2l histone 2, H2, like protein_coding Danio_rerio
ENSDARG00000070289 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000076129 CABZ01086354.1 Histone H2B protein_coding Danio_rerio
ENSDARG00000078724 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000078941 ano9a anoctamin 9a protein_coding Danio_rerio
ENSDARG00000086591 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000087854 ano9a anoctamin 9a protein_coding Danio_rerio
ENSDARG00000088028 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000092743 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000093195 si:dkey-261m9.6 si:dkey-261m9.6 protein_coding Danio_rerio
ENSDARG00000093756 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000094610 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000094744 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSMUSG00000068854 Hist2h2be histone cluster 2, H2be protein_coding Mus_musculus

Loading