C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 193, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125386 FAM193A 9606 + 4:2625261-2732565 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000324666 FAM193A-001 2625432-2732565 protein_coding
  ENST00000382839 FAM193A-002 2625432-2732552 protein_coding
  ENST00000502458 FAM193A-005 2625462-2731889 protein_coding
  ENST00000505311 FAM193A-007 2625462-2731889 protein_coding
  ENST00000506120 FAM193A-010 2696274-2699938 retained_intron
  ENST00000506904 FAM193A-009 2659888-2663203 retained_intron
  ENST00000509050 FAM193A-008 2625261-2631134 protein_coding
  ENST00000512465 FAM193A-003 2625432-2732552 nonsense_mediated_decay
  ENST00000513350 FAM193A-004 2654421-2700501 protein_coding
  ENST00000513898 FAM193A-006 2625462-2731889 nonsense_mediated_decay
  ENST00000545951 FAM193A-201 2625432-2720034 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000382839ENST00000512465ENST00000513350ENST00000545951
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000382839 6.002±0.00 5.514±0.00 1.053±0.00 3.557±2.80 3.130±1.12 1.127±0.00 2.069±1.29 3.276±2.34 1.897±0.00 3.293±1.60 4.776±0.00 4.577±3.13 4.459±0.25 12.659±1.87
ENST00000512465 N/A N/A N/A 0.839±0.00 N/A 5.196±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513350 N/A N/A 0.967±0.00 N/A 1.306±0.00 2.210±0.00 0.390±0.00 1.018±0.00 2.608±0.00 1.790±0.00 N/A 1.866±0.00 N/A N/A
ENST00000545951 N/A N/A N/A N/A N/A N/A N/A N/A 2.569±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057G CIL_00057G_0001 CGP 4:2462220-2732565
CIL_0003OC CIL_0003OC_0002 CGP 4:2625261-2756376

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036595 fam193a family with sequence similarity 193, member A protein_coding Danio_rerio
ENSMUSG00000037210 Fam193a family with sequence similarity 193, member A protein_coding Mus_musculus

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