C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein S7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125445 MRPS7 9606 + 17:75261674-75266373 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000245539 MRPS7-001 75261674-75266373 protein_coding
  ENST00000577767 MRPS7-004 75262609-75263289 retained_intron
  ENST00000579002 MRPS7-003 75261912-75266330 protein_coding
  ENST00000579761 MRPS7-002 75261674-75264490 protein_coding
  ENST00000581993 MRPS7-005 75262626-75266363 protein_coding
  ENST00000583407 MRPS7-007 75261961-75266084 nonsense_mediated_decay
  ENST00000584678 MRPS7-006 75262673-75266373 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000245539ENST00000579002ENST00000583407ENST00000584678
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000245539 10.635±0.00 11.662±0.00 11.286±0.65 8.633±2.86 7.642±1.97 20.843±10.80 8.892±4.15 17.671±0.00 15.306±0.00 11.344±0.00 14.962±5.54 29.364±5.00 14.330±0.00
ENST00000579002 N/A N/A N/A N/A N/A N/A 7.793±0.00 N/A N/A N/A 12.321±0.00 N/A 16.178±0.00
ENST00000583407 14.121±0.00 20.185±0.00 16.721±0.00 18.044±0.00 17.504±0.00 37.770±0.00 13.704±10.46 29.760±0.00 28.884±0.00 17.749±2.97 16.905±6.52 22.556±2.89 19.623±0.00
ENST00000584678 N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.251±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0001 VISTA 17:75051738-75652852
CIL_0007IW CIL_0007IW_0001 CGP 17:75205659-75262363
CIL_0007I1 CIL_0007I1_0001 CGP 17:75236599-75266373
CIL_0003KI CIL_0003KI_0002 CGP 17:75261674-75271227

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 ISS RNA binding
GO:0003735 ISS structural constituent of ribosome
GO:0005739 IEA mitochondrion
GO:0006412 ISS translation
GO:0022627 ISS cytosolic small ribosomal subunit
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042077 mrps7 mitochondrial ribosomal protein S7 protein_coding Danio_rerio
ENSMUSG00000046756 Mrps7 mitchondrial ribosomal protein S7 protein_coding Mus_musculus

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