C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125454 SLC25A19 9606 - 17:75272981-75289510 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000320362 SLC25A19-002 75272993-75289433 protein_coding
  ENST00000375261 SLC25A19-201 75272981-75289449 protein_coding
  ENST00000402418 SLC25A19-005 75272993-75287674 protein_coding
  ENST00000416858 SLC25A19-001 75272992-75289390 protein_coding
  ENST00000442286 SLC25A19-004 75272993-75289390 protein_coding
  ENST00000579207 SLC25A19-010 75283423-75289372 protein_coding
  ENST00000579228 SLC25A19-007 75288120-75289449 retained_intron
  ENST00000580151 SLC25A19-009 75283429-75289406 protein_coding
  ENST00000580273 SLC25A19-006 75278238-75289510 protein_coding
  ENST00000580994 SLC25A19-003 75273030-75289411 protein_coding
  ENST00000581988 SLC25A19-011 75283565-75289360 protein_coding
  ENST00000582778 SLC25A19-015 75286335-75289212 protein_coding
  ENST00000582822 SLC25A19-013 75272992-75286723 protein_coding
  ENST00000583332 SLC25A19-014 75273551-75289386 protein_coding
  ENST00000584438 SLC25A19-008 75286647-75289422 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000320362ENST00000375261ENST00000402418ENST00000416858ENST00000442286ENST00000579207ENST00000579228ENST00000580273ENST00000580994ENST00000582822ENST00000584438
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000320362 0.602±0.00 N/A N/A N/A N/A N/A N/A N/A 0.357±0.00 N/A N/A N/A N/A 3.747±0.00
ENST00000375261 N/A N/A N/A 1.251±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.839±0.00
ENST00000402418 0.598±0.00 1.503±0.00 N/A 0.323±0.00 0.406±0.00 0.319±0.00 0.260±0.00 N/A 0.121±0.00 N/A N/A 0.867±0.00 N/A N/A
ENST00000416858 N/A N/A N/A N/A N/A N/A 0.653±0.00 N/A N/A 0.929±0.00 1.932±0.00 N/A 1.611±0.06 N/A
ENST00000442286 0.585±0.00 2.304±0.00 N/A 0.757±0.00 1.445±0.00 4.979±0.00 1.189±0.00 5.792±0.00 0.937±0.00 3.890±0.00 2.127±0.00 3.731±0.94 2.801±0.90 9.807±0.00
ENST00000579207 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.650±0.00 N/A N/A N/A N/A
ENST00000579228 N/A N/A N/A 0.729±0.00 N/A 0.658±0.00 N/A 0.706±0.00 N/A N/A 0.877±0.00 1.586±0.00 N/A N/A
ENST00000580273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.073±0.00 N/A N/A N/A
ENST00000580994 N/A 1.560±0.00 N/A N/A 1.677±0.00 N/A 0.521±0.00 N/A N/A N/A N/A 2.354±0.27 2.047±0.31 12.599±5.91
ENST00000582822 N/A N/A 0.488±0.00 2.004±0.56 N/A N/A 1.855±0.00 4.239±2.09 1.254±0.00 2.617±1.76 2.105±0.00 3.970±0.00 N/A 18.145±0.00
ENST00000584438 N/A N/A N/A N/A 1.259±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0001 VISTA 17:75051738-75652852
CIL_0007IU CIL_0007IU_0001 CGP 17:75266228-75289510
CIL_00021R CIL_00021R_0001 CGP 17:75272981-75405709

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005739 IEA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006810 IEA transport
GO:0016021 IEA integral component of membrane
GO:0030233 TAS deoxynucleotide transmembrane transporter activity
GO:0030302 NAS deoxynucleotide transport
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079990 slc25a19 solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 protein_coding Danio_rerio
ENSMUSG00000020744 Slc25a19 solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 protein_coding Mus_musculus

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