C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 1 open reading frame 61
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125462 C1orf61 9606 - 1:156404250-156430701 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000310027 C1orf61-008 156404261-156429413 protein_coding
  ENST00000357975 C1orf61-010 156404412-156429410 protein_coding
  ENST00000368242 C1orf61-017 156404253-156420336 protein_coding
  ENST00000368243 C1orf61-001 156404263-156429392 protein_coding
  ENST00000400991 C1orf61-003 156404252-156429423 protein_coding
  ENST00000462458 C1orf61-006 156404258-156416939 processed_transcript
  ENST00000463309 C1orf61-014 156413916-156421756 processed_transcript
  ENST00000464203 C1orf61-011 156414107-156421809 processed_transcript
  ENST00000464238 C1orf61-023 156404508-156413478 processed_transcript
  ENST00000465270 C1orf61-016 156404257-156421752 processed_transcript
  ENST00000465570 C1orf61-024 156404261-156412708 processed_transcript
  ENST00000469813 C1orf61-004 156425637-156430701 processed_transcript
  ENST00000471156 C1orf61-021 156404256-156426872 processed_transcript
  ENST00000476966 C1orf61-005 156411831-156429429 processed_transcript
  ENST00000482932 C1orf61-012 156407174-156421756 processed_transcript
  ENST00000484428 C1orf61-022 156407842-156429401 processed_transcript
  ENST00000486517 C1orf61-015 156404259-156421752 processed_transcript
  ENST00000488498 C1orf61-027 156404257-156409030 processed_transcript
  ENST00000489877 C1orf61-020 156407854-156429399 processed_transcript
  ENST00000489918 C1orf61-018 156407697-156420318 processed_transcript
  ENST00000492750 C1orf61-019 156404380-156420289 processed_transcript
  ENST00000495000 C1orf61-009 156425825-156429418 processed_transcript
  ENST00000497822 C1orf61-013 156404364-156421758 processed_transcript
  ENST00000497824 C1orf61-002 156404256-156429579 processed_transcript
  ENST00000498346 C1orf61-025 156404264-156408091 processed_transcript
  ENST00000608007 C1orf61-026 156404250-156417439 retained_intron
  ENST00000615748 C1orf61-201 156404257-156416839 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000400991ENST00000462458ENST00000464238ENST00000465270ENST00000465570ENST00000469813ENST00000476966ENST00000486517ENST00000488498ENST00000495000ENST00000497822ENST00000497824ENST00000608007
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000400991 N/A N/A 56.354±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462458 N/A N/A N/A N/A N/A N/A 0.237±0.00 N/A N/A 0.074±0.00 N/A N/A
ENST00000464238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.438±0.00 N/A
ENST00000465270 N/A N/A 96.689±0.00 N/A N/A N/A N/A N/A N/A N/A 0.469±0.00 N/A
ENST00000465570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.034±0.04
ENST00000469813 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A N/A
ENST00000476966 N/A N/A 3.667±0.00 0.064±0.00 N/A 0.010±0.00 0.034±0.00 0.042±0.00 N/A 0.038±0.00 0.046±0.00 1.610±0.00
ENST00000486517 N/A N/A N/A N/A N/A N/A N/A N/A 0.089±0.00 N/A N/A N/A
ENST00000488498 0.065±0.00 0.373±0.00 2.639±0.00 0.219±0.00 0.138±0.00 0.074±0.00 0.030±0.01 0.178±0.00 0.074±0.00 0.033±0.01 0.037±0.01 0.699±0.10
ENST00000495000 N/A N/A N/A N/A N/A N/A N/A 0.381±0.00 N/A 0.036±0.00 N/A N/A
ENST00000497822 N/A N/A 78.100±0.00 N/A N/A N/A N/A N/A N/A 0.205±0.00 N/A N/A
ENST00000497824 N/A N/A 27.269±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608007 N/A N/A 4.872±0.00 N/A 0.056±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JO CIL_0008JO_0001 VISTA 1:156202708-156805613
CIL_000850 CIL_000850_0001 VISTA 1:156360457-156965492

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus

Homologs

No Homologs available.

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