C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: alkB, alkylation repair homolog 7 (E. coli)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125652 ALKBH7 9606 + 19:6372433-6375251 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000245812 ALKBH7-001 6372433-6375251 protein_coding
  ENST00000596657 ALKBH7-002 6373471-6375027 protein_coding
  ENST00000599849 ALKBH7-003 6373704-6375031 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000245812ENST00000596657ENST00000599849
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000245812 4.169±0.00 4.219±0.00 1.834±0.00 3.407±0.87 4.454±2.16 3.396±0.00 8.196±4.37 10.148±0.00 5.672±4.36 2.550±2.09 6.053±2.22 4.107±1.82 10.062±1.54 70.755±32.45
ENST00000596657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 62.004±0.00
ENST00000599849 25.937±0.00 25.819±0.00 2.446±0.00 19.095±0.00 40.719±0.00 92.078±0.00 46.959±0.00 59.341±0.00 32.520±30.76 21.597±18.80 17.765±10.62 64.975±0.00 68.377±6.94 201.512±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005OH CIL_0005OH_0001 CGP 19:6361452-6375251
CIL_0005OG CIL_0005OG_0001 CGP 19:6372433-6379058

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005759 IDA mitochondrial matrix
GO:0006631 ISS fatty acid metabolic process
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0010883 ISS regulation of lipid storage
GO:0046872 IEA metal ion binding
GO:0051213 IEA dioxygenase activity
GO:0055114 IEA oxidation-reduction process
GO:1902445 IMP regulation of mitochondrial membrane permeability involved in programmed necrotic cell death

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037906 alkbh7 alkB, alkylation repair homolog 7 (E. coli) protein_coding Danio_rerio
ENSMUSG00000002661 Alkbh7 alkB, alkylation repair homolog 7 (E. coli) protein_coding Mus_musculus

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