C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH2 domain containing 3A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125731 SH2D3A 9606 - 19:6752160-6767588 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000245908 SH2D3A-001 6752298-6767588 protein_coding
  ENST00000437152 SH2D3A-004 6752165-6767435 protein_coding
  ENST00000595369 SH2D3A-003 6757330-6764481 retained_intron
  ENST00000595681 SH2D3A-002 6753583-6767435 retained_intron
  ENST00000597168 SH2D3A-008 6752160-6755241 processed_transcript
  ENST00000597254 SH2D3A-005 6754906-6767425 processed_transcript
  ENST00000597687 SH2D3A-007 6754616-6767463 protein_coding
  ENST00000599563 SH2D3A-006 6754974-6761165 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000245908ENST00000437152ENST00000595369ENST00000595681ENST00000597168ENST00000597687ENST00000599563
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000245908 N/A 1.091±0.00 0.187±0.00 N/A 0.706±0.00 N/A N/A 0.754±0.00 0.203±0.00 5.191±0.00 N/A N/A 2.615±0.91 1.910±0.00
ENST00000437152 0.171±0.00 1.912±0.00 N/A N/A 0.931±0.00 0.390±0.00 0.098±0.00 2.511±0.00 0.651±0.00 N/A 0.491±0.00 N/A 3.315±1.42 1.031±0.40
ENST00000595369 0.134±0.00 1.116±0.00 N/A 0.257±0.00 0.337±0.00 0.256±0.00 0.142±0.00 N/A 0.081±0.00 0.410±0.00 0.086±0.00 0.359±0.18 0.357±0.00 N/A
ENST00000595681 N/A 1.466±0.00 0.184±0.00 N/A 0.472±0.00 N/A N/A 1.329±0.00 N/A N/A N/A 2.958±0.00 N/A 0.804±0.00
ENST00000597168 0.614±0.00 N/A 1.192±0.00 N/A N/A N/A N/A N/A 1.083±0.00 N/A 0.440±0.00 1.760±0.00 N/A N/A
ENST00000597687 N/A N/A N/A N/A 1.600±0.00 2.654±0.00 0.312±0.00 N/A N/A 1.777±0.00 N/A 1.098±0.00 6.615±0.00 N/A
ENST00000599563 N/A N/A N/A N/A N/A 2.672±0.00 N/A N/A 1.361±0.00 N/A N/A 1.649±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005070 TAS SH3/SH2 adaptor activity
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005515 IPI protein binding
GO:0007254 TAS JNK cascade
GO:0007264 IEA small GTPase mediated signal transduction
GO:0009967 TAS positive regulation of signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

No Homologs available.

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