C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thyroid hormone receptor interactor 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125733 TRIP10 9606 + 19:6737925-6751526 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000313244 TRIP10-003 6739727-6751523 protein_coding
  ENST00000313285 TRIP10-001 6739680-6751526 protein_coding
  ENST00000595305 TRIP10-004 6739727-6751526 retained_intron
  ENST00000595319 TRIP10-007 6740944-6743829 retained_intron
  ENST00000596078 TRIP10-008 6740909-6743890 retained_intron
  ENST00000596543 TRIP10-015 6739032-6743081 processed_transcript
  ENST00000596673 TRIP10-011 6740918-6743769 protein_coding
  ENST00000596758 TRIP10-005 6739762-6751464 protein_coding
  ENST00000598843 TRIP10-012 6746308-6750373 retained_intron
  ENST00000600428 TRIP10-014 6737925-6751500 protein_coding
  ENST00000600491 TRIP10-010 6740683-6745200 retained_intron
  ENST00000600677 TRIP10-013 6739714-6751509 nonsense_mediated_decay
  ENST00000601303 TRIP10-009 6741225-6743412 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000313244ENST00000313285ENST00000595319ENST00000596758ENST00000598843ENST00000600428ENST00000600677
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000313244 6.635±0.00 N/A N/A N/A 7.907±0.00 7.175±0.00 11.309±10.50 10.072±0.00 1.509±0.00 24.163±0.00 61.024±40.02 15.612±6.16 11.423±0.01 7.608±0.00
ENST00000313285 12.949±0.00 7.735±0.00 N/A 2.113±1.81 3.279±0.00 11.929±0.00 0.327±0.00 6.981±0.00 5.629±0.00 23.402±19.67 N/A 31.551±22.29 23.730±6.25 9.702±2.90
ENST00000595319 N/A N/A N/A N/A 3.781±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596758 11.524±0.00 N/A N/A 1.883±1.74 7.993±0.00 7.806±4.96 14.179±0.00 9.280±0.00 0.960±0.00 61.871±0.00 31.802±0.00 14.942±0.00 28.353±0.00 14.610±1.48
ENST00000598843 N/A N/A 4.853±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.881±0.00 19.866±0.00
ENST00000600428 N/A N/A 2.581±0.00 N/A N/A N/A N/A 1.004±0.00 N/A N/A N/A N/A N/A N/A
ENST00000600677 N/A N/A N/A N/A N/A N/A N/A N/A 1.704±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006IY CIL_0006IY_0001 CGP 19:6729914-6751526

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 NAS cytoplasm
GO:0005764 IEA lysosome
GO:0005794 IEA Golgi apparatus
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0006897 IEA endocytosis
GO:0007154 NAS cell communication
GO:0007165 TAS signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0008289 IEA lipid binding
GO:0030036 IEA:NAS actin cytoskeleton organization
GO:0042802 IPI identical protein binding
GO:0042995 IEA cell projection
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0051056 TAS regulation of small GTPase mediated signal transduction
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005679 TRIP10 thyroid hormone receptor interactor 10 protein_coding Danio_rerio
ENSDARG00000077953 thyroid hormone receptor interactor 10 protein_coding Danio_rerio
ENSMUSG00000019487 Trip10 thyroid hormone receptor interactor 10 protein_coding Mus_musculus

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