C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: beaded filament structural protein 1, filensin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125864 BFSP1 9606 - 20:17493905-17569220 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000377868 BFSP1-002 17493905-17558960 protein_coding
  ENST00000377873 BFSP1-001 17493905-17531369 protein_coding
  ENST00000473415 BFSP1-003 17511992-17569220 processed_transcript
  ENST00000492424 BFSP1-004 17506828-17514741 processed_transcript
  ENST00000536626 BFSP1-201 17493906-17569220 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000377868ENST00000377873ENST00000492424ENST00000536626
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000377868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.368±0.00 0.839±0.00 N/A
ENST00000377873 0.208±0.00 1.049±0.00 N/A 1.039±0.25 0.557±0.43 0.236±0.17 0.132±0.10 0.805±0.00 0.310±0.14 0.209±0.11 1.713±0.94 1.725±0.39 3.596±2.81
ENST00000492424 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.447±0.00 N/A N/A N/A
ENST00000536626 N/A 0.277±0.00 0.119±0.00 N/A N/A 0.220±0.14 0.057±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007A3 CIL_0007A3_0002 CGP 20:17226107-17569220
CIL_0002DJ CIL_0002DJ_0001 CGP 20:17493905-17609919

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005212 IEA structural constituent of eye lens
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005882 IEA intermediate filament
GO:0005886 IDA plasma membrane
GO:0008150 ND biological_process
GO:0015629 IDA actin cytoskeleton
GO:0048469 IEA cell maturation
GO:0070307 IEA lens fiber cell development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074919 CU929052.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000027420 Bfsp1 beaded filament structural protein 1, in lens-CP94 protein_coding Mus_musculus

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