C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ST3 beta-galactoside alpha-2,3-sialyltransferase 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000126091 ST3GAL3 9606 + 1:43705824-43931165 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262915 ST3GAL3-201 43707533-43931165 protein_coding
  ENST00000330208 ST3GAL3-202 43707533-43931165 protein_coding
  ENST00000332628 ST3GAL3-033 43736263-43930221 protein_coding
  ENST00000335430 ST3GAL3-203 43707533-43931165 protein_coding
  ENST00000347631 ST3GAL3-006 43707573-43930221 protein_coding
  ENST00000351035 ST3GAL3-204 43707533-43931165 protein_coding
  ENST00000353126 ST3GAL3-205 43707533-43931165 protein_coding
  ENST00000361392 ST3GAL3-001 43707547-43931159 protein_coding
  ENST00000361400 ST3GAL3-002 43707547-43931159 protein_coding
  ENST00000361746 ST3GAL3-004 43736263-43930221 protein_coding
  ENST00000361812 ST3GAL3-007 43736263-43930202 protein_coding
  ENST00000372362 ST3GAL3-012 43736263-43930202 protein_coding
  ENST00000372365 ST3GAL3-009 43736263-43930221 protein_coding
  ENST00000372366 ST3GAL3-008 43736263-43930221 protein_coding
  ENST00000372367 ST3GAL3-005 43736263-43930221 protein_coding
  ENST00000372368 ST3GAL3-010 43736263-43930221 protein_coding
  ENST00000372369 ST3GAL3-003 43736263-43930221 protein_coding
  ENST00000372372 ST3GAL3-011 43736263-43930221 protein_coding
  ENST00000372374 ST3GAL3-206 43707533-43931165 protein_coding
  ENST00000461066 ST3GAL3-035 43707643-43838311 nonsense_mediated_decay
  ENST00000461375 ST3GAL3-022 43792108-43920504 processed_transcript
  ENST00000469715 ST3GAL3-018 43736263-43930221 nonsense_mediated_decay
  ENST00000479383 ST3GAL3-020 43707558-43838251 nonsense_mediated_decay
  ENST00000484868 ST3GAL3-019 43707640-43771999 processed_transcript
  ENST00000489897 ST3GAL3-016 43707545-43930219 nonsense_mediated_decay
  ENST00000490502 ST3GAL3-024 43899588-43930176 protein_coding
  ENST00000490541 ST3GAL3-013 43736263-43930221 nonsense_mediated_decay
  ENST00000495482 ST3GAL3-023 43920123-43930443 retained_intron
  ENST00000528371 ST3GAL3-025 43736263-43930221 protein_coding
  ENST00000530154 ST3GAL3-032 43707547-43920217 nonsense_mediated_decay
  ENST00000530581 ST3GAL3-031 43736263-43930221 nonsense_mediated_decay
  ENST00000531451 ST3GAL3-017 43736263-43930202 protein_coding
  ENST00000531816 ST3GAL3-034 43736263-43930221 protein_coding
  ENST00000531993 ST3GAL3-026 43736263-43930221 protein_coding
  ENST00000532911 ST3GAL3-021 43705824-43838246 nonsense_mediated_decay
  ENST00000533212 ST3GAL3-030 43736263-43930221 nonsense_mediated_decay
  ENST00000533933 ST3GAL3-027 43736263-43930221 protein_coding
  ENST00000533997 ST3GAL3-028 43736263-43930221 nonsense_mediated_decay
  ENST00000545417 ST3GAL3-207 43707533-43931165 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262915ENST00000332628ENST00000351035ENST00000353126ENST00000361392ENST00000361400ENST00000361812ENST00000372362ENST00000372368ENST00000372374ENST00000461375ENST00000479383ENST00000489897ENST00000490502ENST00000495482ENST00000530154ENST00000531993ENST00000533212ENST00000533933ENST00000533997
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262915 0.848±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000332628 N/A N/A N/A N/A N/A N/A 0.617±0.00 N/A 2.665±0.00 N/A N/A N/A N/A N/A
ENST00000351035 N/A N/A N/A N/A N/A N/A N/A N/A 1.176±0.00 N/A N/A N/A N/A N/A
ENST00000353126 N/A N/A N/A N/A N/A 0.544±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000361392 3.587±0.00 4.436±0.00 N/A 4.073±0.00 3.708±0.00 5.925±0.00 6.699±0.00 2.321±0.00 1.787±0.00 N/A 16.501±14.82 8.251±1.29 4.876±1.92 N/A
ENST00000361400 N/A N/A N/A 6.308±0.00 4.487±0.00 1.938±0.00 1.635±0.00 2.089±0.00 1.108±0.00 1.405±0.00 N/A 2.041±1.01 N/A 4.545±0.00
ENST00000361812 N/A N/A N/A N/A N/A 0.904±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000372362 N/A N/A N/A N/A N/A N/A 1.095±0.00 2.355±0.00 6.162±0.00 2.436±0.00 10.491±0.00 N/A N/A N/A
ENST00000372368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.853±0.00 N/A N/A N/A
ENST00000372374 N/A N/A N/A N/A N/A N/A 0.180±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000461375 N/A N/A N/A N/A N/A 0.403±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479383 N/A N/A 0.339±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489897 N/A N/A N/A N/A N/A N/A 0.582±0.00 N/A N/A N/A 3.278±0.00 2.132±0.00 N/A N/A
ENST00000490502 N/A N/A N/A N/A N/A N/A N/A 0.725±0.00 N/A N/A N/A N/A N/A N/A
ENST00000495482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.896±0.00 N/A N/A N/A
ENST00000530154 N/A N/A N/A N/A N/A 0.115±0.00 N/A N/A N/A N/A N/A 0.411±0.00 N/A 5.765±0.00
ENST00000531993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.534±0.00 N/A N/A
ENST00000533212 N/A N/A 1.054±0.00 N/A 1.397±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533933 N/A N/A N/A N/A 2.205±0.00 N/A N/A N/A N/A N/A N/A 0.584±0.00 7.604±0.00 N/A
ENST00000533997 N/A N/A 0.230±0.00 N/A N/A N/A N/A 0.890±0.00 N/A N/A N/A 2.256±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005B8 CIL_0005B8_0002 CGP 1:43650158-43931165
CIL_0005B9 CIL_0005B9_0002 CGP 1:43705824-43937241

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0003836 IEA beta-galactoside (CMP) alpha-2,3-sialyltransferase activity
GO:0005576 IEA extracellular region
GO:0005975 TAS carbohydrate metabolic process
GO:0006486 IEA protein glycosylation
GO:0008118 IEA N-acetyllactosaminide alpha-2,3-sialyltransferase activity
GO:0008373 IEA sialyltransferase activity
GO:0016266 TAS O-glycan processing
GO:0018146 TAS keratan sulfate biosynthetic process
GO:0030173 IEA integral component of Golgi membrane
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0042339 TAS keratan sulfate metabolic process
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015252 st3gal3b ST3 beta-galactoside alpha-2,3-sialyltransferase 3b protein_coding Danio_rerio
ENSDARG00000015374 st3gal3a ST3 beta-galactoside alpha-2,3-sialyltransferase 3a protein_coding Danio_rerio
ENSMUSG00000028538 St3gal3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 protein_coding Mus_musculus

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