C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tubulin, gamma complex associated protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000126216 TUBGCP3 9606 - 13:112485005-112588167 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261965 TUBGCP3-001 112485005-112588167 protein_coding
  ENST00000375669 TUBGCP3-002 112498807-112588125 protein_coding
  ENST00000462580 TUBGCP3-006 112522320-112546203 processed_transcript
  ENST00000464139 TUBGCP3-004 112546482-112588135 protein_coding
  ENST00000469302 TUBGCP3-003 112485844-112489823 processed_transcript
  ENST00000483532 TUBGCP3-005 112558196-112587346 processed_transcript
  ENST00000611152 TUBGCP3-007 112544556-112548172 protein_coding
  ENST00000618439 TUBGCP3-201 112546486-112588135 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261965ENST00000375669ENST00000462580ENST00000464139ENST00000611152ENST00000618439
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261965 3.485±0.00 3.664±0.00 0.441±0.00 2.959±1.49 2.440±0.56 1.358±0.62 1.240±0.78 3.478±0.60 1.968±1.11 0.953±0.00 2.011±0.00 6.250±2.69 3.077±0.72 7.749±1.27
ENST00000375669 1.781±0.00 N/A N/A 1.169±0.00 N/A 1.550±0.00 0.692±0.15 N/A N/A 0.781±0.00 N/A 5.010±0.51 1.110±0.23 3.843±0.00
ENST00000462580 N/A N/A N/A N/A N/A 2.161±0.00 N/A 3.007±0.00 N/A N/A N/A N/A N/A N/A
ENST00000464139 N/A N/A N/A N/A N/A N/A N/A N/A 1.485±0.00 N/A N/A N/A N/A N/A
ENST00000611152 N/A N/A 0.711±0.00 N/A 1.742±0.00 N/A N/A N/A N/A 1.851±0.00 0.163±0.00 N/A N/A N/A
ENST00000618439 N/A 2.312±0.00 N/A N/A N/A 1.344±0.00 N/A N/A N/A 2.003±0.00 N/A 4.148±0.00 1.236±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014D CIL_00014D_0001 CGP 13:112376319-112588167

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000226 IEA microtubule cytoskeleton organization
GO:0000278 TAS mitotic cell cycle
GO:0000922 IEA spindle pole
GO:0005198 NAS structural molecule activity
GO:0005200 NAS structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005813 NAS centrosome
GO:0005814 IDA centriole
GO:0005815 IEA microtubule organizing center
GO:0005819 NAS spindle
GO:0005827 IDA polar microtubule
GO:0005829 TAS cytosol
GO:0007020 NAS microtubule nucleation
GO:0007338 NAS single fertilization
GO:0016020 IDA membrane
GO:0043015 IDA gamma-tubulin binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029133 tubgcp3 tubulin, gamma complex associated protein 3 protein_coding Danio_rerio
ENSMUSG00000000759 Tubgcp3 tubulin, gamma complex associated protein 3 protein_coding Mus_musculus

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