C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coagulation factor X
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000126218 F10 9606 + 13:113122814-113149529 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000375551 F10-002 113122814-113149527 protein_coding
  ENST00000375559 F10-001 113122818-113149529 protein_coding
  ENST00000409306 F10-007 113122814-113149462 protein_coding
  ENST00000410083 F10-006 113122838-113147472 nonsense_mediated_decay
  ENST00000477269 F10-003 113122819-113144218 retained_intron
  ENST00000483537 F10-005 113122836-113130306 processed_transcript
  ENST00000498455 F10-004 113140520-113147451 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375551ENST00000375559ENST00000409306ENST00000410083ENST00000477269ENST00000483537ENST00000498455
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375551 1.478±0.00 N/A N/A 0.322±0.00 N/A 3.599±0.00 N/A N/A 5.909±5.08 N/A N/A 1.885±0.35 2.308±0.00 N/A
ENST00000375559 8.670±0.00 7.189±0.00 N/A N/A 7.469±0.00 1.048±0.60 2.303±0.00 11.454±10.77 27.934±25.72 6.427±5.70 0.529±0.00 17.787±11.97 5.786±1.37 20.382±13.37
ENST00000409306 N/A 1.720±0.00 0.169±0.00 0.113±0.00 0.432±0.00 N/A 0.548±0.00 N/A N/A N/A 0.900±0.27 1.690±0.00 N/A N/A
ENST00000410083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.755±0.00
ENST00000477269 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.191±0.00 N/A 6.017±0.00 12.969±0.00 6.515±0.00
ENST00000483537 N/A N/A N/A 0.220±0.00 0.515±0.00 1.600±0.00 0.781±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000498455 N/A N/A N/A 0.144±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00017F CIL_00017F_0001 CGP 13:113105788-113149529
CIL_00058G CIL_00058G_0002 CGP 13:113122814-113172383

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004252 IEA serine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005543 IDA phospholipid binding
GO:0005576 IEA extracellular region
GO:0005788 TAS endoplasmic reticulum lumen
GO:0005796 TAS Golgi lumen
GO:0005886 TAS plasma membrane
GO:0006508 IEA proteolysis
GO:0007596 IC:IEA blood coagulation
GO:0007597 TAS blood coagulation, intrinsic pathway
GO:0007598 TAS blood coagulation, extrinsic pathway
GO:0016020 IEA membrane
GO:0017187 TAS peptidyl-glutamic acid carboxylation
GO:0030335 TAS positive regulation of cell migration
GO:0031233 IC intrinsic component of external side of plasma membrane
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0051897 IDA positive regulation of protein kinase B signaling

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088581 f10 coagulation factor X protein_coding Danio_rerio
ENSMUSG00000031444 F10 coagulation factor X protein_coding Mus_musculus

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