C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein arginine methyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000126457 PRMT1 9606 + 19:49675786-49689029 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000391851 PRMT1-001 49677152-49688447 protein_coding
  ENST00000454376 PRMT1-005 49677272-49688447 protein_coding
  ENST00000524771 PRMT1-014 49677294-49684962 protein_coding
  ENST00000525616 PRMT1-018 49677277-49685028 retained_intron
  ENST00000525915 PRMT1-013 49677267-49680119 retained_intron
  ENST00000526224 PRMT1-015 49678225-49684818 protein_coding
  ENST00000527382 PRMT1-007 49676226-49685032 protein_coding
  ENST00000527412 PRMT1-016 49679775-49682249 protein_coding
  ENST00000527866 PRMT1-021 49687853-49689029 processed_transcript
  ENST00000528126 PRMT1-020 49685724-49686726 retained_intron
  ENST00000528623 PRMT1-008 49676241-49681979 protein_coding
  ENST00000529284 PRMT1-006 49675786-49684816 protein_coding
  ENST00000529650 PRMT1-019 49683635-49684797 retained_intron
  ENST00000529836 PRMT1-010 49677502-49682249 protein_coding
  ENST00000530070 PRMT1-022 49684827-49685555 processed_transcript
  ENST00000530361 PRMT1-023 49685305-49688419 processed_transcript
  ENST00000532489 PRMT1-002 49675897-49688447 protein_coding
  ENST00000534280 PRMT1-009 49677173-49684069 nonsense_mediated_decay
  ENST00000534465 PRMT1-011 49677073-49685043 protein_coding
  ENST00000534676 PRMT1-017 49677249-49685215 retained_intron
  ENST00000610806 PRMT1-201 49677152-49688450 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000391851ENST00000454376ENST00000525616ENST00000526224ENST00000527382ENST00000527412ENST00000528126ENST00000610806
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000391851 60.031±0.00 97.089±0.00 N/A 20.294±12.65 21.555±16.33 26.197±21.12 17.161±13.76 23.102±22.10 10.978±3.87 37.339±32.74 54.242±46.20 79.246±53.91 52.507±33.68 76.537±0.00
ENST00000454376 N/A N/A 2.548±0.00 7.599±4.77 5.781±1.66 12.732±0.00 7.456±3.81 7.280±2.25 2.844±0.17 13.797±0.00 8.929±0.00 23.751±3.11 18.591±3.65 17.597±3.39
ENST00000525616 N/A N/A N/A N/A N/A 7.308±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526224 N/A N/A 4.725±0.00 6.369±0.00 N/A N/A N/A 6.269±0.00 N/A 9.265±0.00 19.109±0.00 N/A N/A N/A
ENST00000527382 N/A N/A N/A N/A 9.344±0.00 N/A 5.055±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000527412 N/A N/A N/A 9.432±0.00 N/A 9.438±0.00 N/A N/A N/A N/A N/A 18.870±0.00 19.628±0.00 20.716±0.00
ENST00000528126 N/A N/A 2.315±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.147±0.00 N/A 14.057±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001701 IEA in utero embryonic development
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 TAS:IEA cytoplasm
GO:0005829 IBA cytosol
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0006479 TAS:IEA protein methylation
GO:0007166 TAS cell surface receptor signaling pathway
GO:0008152 IEA metabolic process
GO:0008168 TAS:IEA methyltransferase activity
GO:0008170 IDA N-methyltransferase activity
GO:0008276 IEA protein methyltransferase activity
GO:0008469 IEA histone-arginine N-methyltransferase activity
GO:0016274 IEA protein-arginine N-methyltransferase activity
GO:0016275 IEA [cytochrome c]-arginine N-methyltransferase activity
GO:0016571 IDA histone methylation
GO:0018216 IDA peptidyl-arginine methylation
GO:0019919 IBA peptidyl-arginine methylation, to asymmetrical-dimethyl arginine
GO:0030519 IEA snoRNP binding
GO:0031175 IMP neuron projection development
GO:0035241 IEA protein-arginine omega-N monomethyltransferase activity
GO:0035242 IBA protein-arginine omega-N asymmetric methyltransferase activity
GO:0035247 IEA peptidyl-arginine omega-N-methylation
GO:0042054 IDA histone methyltransferase activity
GO:0042802 IPI identical protein binding
GO:0043234 IEA protein complex
GO:0043985 IDA histone H4-R3 methylation
GO:0044020 IDA histone methyltransferase activity (H4-R3 specific)
GO:0044822 IDA poly(A) RNA binding
GO:0045653 IDA negative regulation of megakaryocyte differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010246 prmt1 protein arginine methyltransferase 1 protein_coding Danio_rerio
ENSMUSG00000052429 Prmt1 protein arginine N-methyltransferase 1 protein_coding Mus_musculus

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