C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interferon, alpha-inducible protein 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000126709 IFI6 9606 - 1:27666061-27672218 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000339145 IFI6-003 27666064-27672178 protein_coding
  ENST00000361157 IFI6-001 27666061-27672218 protein_coding
  ENST00000362020 IFI6-002 27666066-27672198 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000339145ENST00000361157ENST00000362020
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000339145 N/A N/A N/A N/A 5.575±0.00 N/A N/A N/A 2.579±0.00 N/A N/A N/A N/A N/A
ENST00000361157 25.314±0.00 24.611±0.00 9.196±0.00 30.495±7.09 20.852±14.56 17.882±8.41 18.560±6.40 24.840±3.42 13.851±1.67 78.554±35.84 3.813±0.68 86.341±47.85 950.933±244.37 46.961±22.72
ENST00000362020 N/A 4.135±0.00 1.774±0.00 12.248±5.38 10.471±4.40 1.483±0.00 7.266±0.85 5.933±1.65 15.056±0.00 24.820±9.34 5.791±0.12 25.248±4.73 208.180±55.41 14.544±3.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WN CIL_0008WN_0001 VISTA 1:27203963-27805666

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001836 IMP release of cytochrome c from mitochondria
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005886 TAS plasma membrane
GO:0006955 TAS immune response
GO:0016021 IEA integral component of membrane
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0043154 IMP negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0051902 IMP negative regulation of mitochondrial depolarization
GO:0060337 TAS type I interferon signaling pathway
GO:2001240 IMP negative regulation of extrinsic apoptotic signaling pathway in absence of ligand

Homologs

No Homologs available.

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