C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 35, member E1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000127526 SLC35E1 9606 - 19:16549831-16572382 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000409648 SLC35E1-007 16550850-16571536 nonsense_mediated_decay
  ENST00000421082 SLC35E1-005 16553817-16557135 protein_coding
  ENST00000436553 SLC35E1-004 16553371-16572304 protein_coding
  ENST00000469055 SLC35E1-006 16553849-16555601 retained_intron
  ENST00000470077 SLC35E1-003 16555349-16566591 processed_transcript
  ENST00000488894 SLC35E1-002 16565228-16572209 retained_intron
  ENST00000593812 SLC35E1-009 16549831-16552333 processed_transcript
  ENST00000595753 SLC35E1-001 16549831-16572382 protein_coding
  ENST00000596387 SLC35E1-011 16551759-16552328 processed_transcript
  ENST00000600356 SLC35E1-010 16553389-16564255 processed_transcript
  ENST00000611092 SLC35E1-201 16551773-16555471 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409648ENST00000436553ENST00000595753ENST00000611092
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409648 15.130±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436553 N/A N/A 5.879±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595753 10.539±0.00 19.944±0.00 N/A 6.271±3.32 8.739±4.99 9.753±5.52 3.883±1.60 10.570±6.56 5.997±3.25 13.622±11.35 14.196±0.00 17.150±9.02 10.135±1.56 11.216±0.00
ENST00000611092 N/A N/A N/A N/A N/A N/A N/A N/A 4.629±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071T CIL_00071T_0001 CGP 19:16517889-16572382
CIL_0006G5 CIL_0006G5_0001 CGP 19:16549831-16629062

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006810 IEA transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011945 slc35e1 solute carrier family 35, member E1 protein_coding Danio_rerio
ENSMUSG00000019731 Slc35e1 solute carrier family 35, member E1 protein_coding Mus_musculus

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