C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: intraflagellar transport 22
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000128581 IFT22 9606 - 7:101313367-101321823 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000315322 IFT22-001 101314656-101321803 protein_coding
  ENST00000422177 IFT22-009 101313694-101321794 nonsense_mediated_decay
  ENST00000430911 IFT22-006 101314878-101321797 nonsense_mediated_decay
  ENST00000437644 IFT22-004 101314795-101321777 protein_coding
  ENST00000440362 IFT22-002 101314788-101321790 retained_intron
  ENST00000468833 IFT22-003 101315493-101321790 retained_intron
  ENST00000485695 IFT22-008 101315825-101321785 retained_intron
  ENST00000495166 IFT22-005 101315072-101321823 processed_transcript
  ENST00000498704 IFT22-007 101314753-101321764 protein_coding
  ENST00000517481 IFT22-010 101314175-101321776 protein_coding
  ENST00000621899 IFT22-201 101313367-101321823 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000315322ENST00000422177ENST00000430911ENST00000437644ENST00000440362ENST00000495166ENST00000498704ENST00000517481ENST00000621899
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000315322 N/A N/A 0.648±0.00 N/A 1.559±0.00 N/A N/A N/A 1.034±0.00 0.796±0.00 N/A 11.088±1.85 4.963±1.12 38.016±0.00
ENST00000422177 1.803±0.00 3.123±0.00 N/A 3.427±0.00 0.982±0.72 1.595±0.00 0.996±0.64 3.425±0.00 1.124±0.00 2.740±0.00 0.826±0.00 N/A N/A N/A
ENST00000430911 N/A N/A N/A N/A 3.276±0.00 N/A 2.018±0.00 N/A 1.052±0.00 3.768±0.00 4.521±0.00 7.028±0.00 3.550±0.00 31.397±0.00
ENST00000437644 N/A N/A N/A 2.584±0.00 2.876±0.00 2.073±1.66 3.202±0.00 N/A 1.284±0.00 3.278±0.00 7.483±0.00 3.884±1.35 2.196±0.00 21.349±0.00
ENST00000440362 N/A N/A 0.218±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495166 N/A N/A N/A 9.573±5.52 N/A 3.466±0.00 2.266±1.15 N/A N/A 0.965±0.00 N/A 3.727±0.00 N/A N/A
ENST00000498704 4.346±0.00 2.635±0.00 2.033±0.00 5.025±0.00 1.575±0.00 7.374±0.00 1.774±1.19 6.010±5.99 0.589±0.00 1.866±0.37 2.287±0.00 7.170±1.15 3.070±0.00 20.023±0.00
ENST00000517481 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.220±0.00 N/A N/A N/A N/A
ENST00000621899 N/A 0.930±0.00 N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005813 IEA centrosome
GO:0005929 IEA cilium
GO:0007264 IEA small GTPase mediated signal transduction
GO:0030992 IEA intraciliary transport particle B

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020822 rabl5 RAB, member RAS oncogene family-like 5 protein_coding Danio_rerio
ENSMUSG00000007987 Ift22 intraflagellar transport 22 protein_coding Mus_musculus

Loading