C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000128609 NDUFA5 9606 - 7:123536997-123558255 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000355749 NDUFA5-001 123541029-123558255 protein_coding
  ENST00000378795 NDUFA5-004 123541096-123557455 protein_coding
  ENST00000459880 NDUFA5-010 123541837-123545825 retained_intron
  ENST00000466896 NDUFA5-009 123541858-123557801 nonsense_mediated_decay
  ENST00000467117 NDUFA5-006 123542001-123557804 processed_transcript
  ENST00000470123 NDUFA5-008 123545611-123557679 protein_coding
  ENST00000471770 NDUFA5-003 123536997-123557780 protein_coding
  ENST00000490618 NDUFA5-002 123554695-123557822 retained_intron
  ENST00000491033 NDUFA5-007 123550209-123557804 retained_intron
  ENST00000492549 NDUFA5-005 123550105-123557818 retained_intron
  ENST00000611607 NDUFA5-201 123541030-123557904 protein_coding
  ENST00000618945 NDUFA5-202 123541030-123557904 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355749ENST00000378795ENST00000459880ENST00000466896ENST00000467117ENST00000492549ENST00000611607ENST00000618945
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355749 N/A N/A 7.389±0.00 30.875±0.00 10.329±0.00 10.890±0.00 20.972±0.00 8.115±0.00 12.981±0.00 5.951±0.00 6.612±0.00 13.162±1.57 N/A N/A
ENST00000378795 6.156±0.00 5.259±0.00 18.197±0.00 32.575±7.70 7.608±1.01 11.811±0.54 24.856±9.76 17.895±1.10 8.632±4.04 9.841±5.59 8.071±2.49 17.843±11.56 11.418±7.68 19.400±4.04
ENST00000459880 N/A N/A 12.985±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466896 5.020±0.00 N/A N/A N/A 8.025±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.872±0.00
ENST00000492549 N/A N/A N/A N/A N/A 18.933±0.00 23.745±0.00 N/A 27.149±0.00 17.112±0.00 N/A N/A N/A N/A
ENST00000611607 N/A N/A N/A N/A N/A N/A N/A 7.169±0.00 4.221±0.00 5.551±0.00 5.378±0.00 11.462±5.31 5.549±1.22 6.003±0.00
ENST00000618945 4.983±0.00 16.234±0.00 N/A 43.968±0.00 12.284±0.00 28.081±0.00 37.296±0.00 31.791±0.00 7.079±0.00 7.090±0.00 8.005±2.60 N/A N/A 19.528±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001E4 CIL_0001E4_0001 CGP 7:123452400-123558255
CIL_0001E5 CIL_0001E5_0001 CGP 7:123536997-123639481

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005743 TAS:IEA mitochondrial inner membrane
GO:0005747 IDA mitochondrial respiratory chain complex I
GO:0006120 NAS mitochondrial electron transport, NADH to ubiquinone
GO:0008137 NAS NADH dehydrogenase (ubiquinone) activity
GO:0016651 IEA oxidoreductase activity, acting on NAD(P)H
GO:0022904 TAS:IEA respiratory electron transport chain
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045271 IEA respiratory chain complex I

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039346 ndufa5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 protein_coding Danio_rerio
ENSMUSG00000023089 Ndufa5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 protein_coding Mus_musculus

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