C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proteasome (prosome, macropain) assembly chaperone 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000128789 PSMG2 9606 + 18:12658043-12725740 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317615 PSMG2-001 12702426-12725740 protein_coding
  ENST00000400512 PSMG2-009 12658246-12658713 processed_transcript
  ENST00000400514 PSMG2-008 12658193-12658893 processed_transcript
  ENST00000585331 PSMG2-006 12658738-12725740 protein_coding
  ENST00000585853 PSMG2-010 12658043-12663471 processed_transcript
  ENST00000586445 PSMG2-007 12686653-12724520 protein_coding
  ENST00000586587 PSMG2-003 12703026-12725658 nonsense_mediated_decay
  ENST00000588824 PSMG2-004 12724128-12725740 retained_intron
  ENST00000589405 PSMG2-005 12658738-12686491 processed_transcript
  ENST00000590217 PSMG2-002 12703023-12724868 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000317615ENST00000585331ENST00000586587
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000317615 8.175±0.00 11.196±0.00 17.851±0.00 12.313±0.00 12.930±0.00 N/A 5.533±0.00 11.424±0.00 27.071±0.00 15.746±4.70 N/A 34.828±0.00
ENST00000585331 18.228±0.00 22.830±0.00 9.131±0.32 17.840±0.00 N/A 17.141±12.42 12.161±0.00 12.020±0.00 N/A 21.835±5.77 21.622±8.40 61.277±0.00
ENST00000586587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.204±2.34 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00010Z CIL_00010Z_0001 CGP 18:12407896-12658134

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0007094 IEA mitotic spindle assembly checkpoint
GO:0043066 IEA negative regulation of apoptotic process
GO:0043248 IDA proteasome assembly
GO:0051726 IEA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035987 psmg2 proteasome (prosome, macropain) assembly chaperone 2 protein_coding Danio_rerio
ENSMUSG00000024537 Psmg2 proteasome (prosome, macropain) assembly chaperone 2 protein_coding Mus_musculus

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