C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myosin VC
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000128833 MYO5C 9606 - 15:52192322-52295798 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261839 MYO5C-001 52192322-52295798 protein_coding
  ENST00000541028 MYO5C-003 52261007-52295768 processed_transcript
  ENST00000558242 MYO5C-008 52251422-52256895 retained_intron
  ENST00000558479 MYO5C-007 52272689-52295773 protein_coding
  ENST00000558902 MYO5C-002 52229230-52295769 nonsense_mediated_decay
  ENST00000559434 MYO5C-006 52236789-52243559 retained_intron
  ENST00000559459 MYO5C-004 52250991-52295744 nonsense_mediated_decay
  ENST00000559696 MYO5C-009 52205048-52213528 retained_intron
  ENST00000560809 MYO5C-005 52192659-52295656 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261839ENST00000541028ENST00000558902ENST00000559434ENST00000559459ENST00000560809
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261839 1.561±0.00 1.180±0.00 0.994±0.00 2.363±0.30 2.818±0.88 0.915±0.00 1.614±1.43 0.463±0.32 2.594±1.65 N/A 2.850±1.15 0.226±0.05 1.102±0.35
ENST00000541028 N/A N/A N/A N/A N/A N/A 1.119±0.00 N/A N/A N/A N/A N/A N/A
ENST00000558902 N/A N/A N/A N/A N/A 0.252±0.00 N/A N/A N/A 0.270±0.00 N/A N/A N/A
ENST00000559434 N/A N/A 1.528±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559459 N/A N/A N/A N/A N/A N/A N/A 0.667±0.00 N/A N/A 3.913±0.00 N/A N/A
ENST00000560809 N/A N/A N/A N/A N/A 0.072±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0008152 IEA metabolic process
GO:0016459 IEA myosin complex
GO:0051015 IEA actin filament binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013782 myo5c myosin VC protein_coding Danio_rerio
ENSMUSG00000033590 Myo5c myosin VC protein_coding Mus_musculus

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