C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MIS18 binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000129534 MIS18BP1 9606 - 14:45203190-45253540 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000310806 MIS18BP1-001 45203190-45253402 protein_coding
  ENST00000451174 MIS18BP1-004 45246821-45253177 protein_coding
  ENST00000453142 MIS18BP1-006 45227803-45242480 nonsense_mediated_decay
  ENST00000454990 MIS18BP1-002 45226826-45253198 nonsense_mediated_decay
  ENST00000469020 MIS18BP1-007 45210111-45224045 retained_intron
  ENST00000470424 MIS18BP1-008 45203837-45206444 retained_intron
  ENST00000492652 MIS18BP1-005 45241468-45242386 processed_transcript
  ENST00000494512 MIS18BP1-003 45237697-45253540 processed_transcript
  ENST00000496413 MIS18BP1-009 45204380-45206274 retained_intron
  ENST00000554093 MIS18BP1-010 45210463-45224124 nonsense_mediated_decay
  ENST00000555653 MIS18BP1-011 45227687-45231441 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000310806ENST00000454990ENST00000469020ENST00000470424ENST00000554093ENST00000555653
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000310806 1.582±0.00 0.917±0.00 0.160±0.00 0.523±0.00 1.206±0.37 1.100±0.36 0.558±0.34 0.835±0.18 0.508±0.38 1.113±0.49 0.081±0.01 2.319±1.76 1.229±0.41 2.555±0.06
ENST00000454990 N/A N/A 0.872±0.00 0.571±0.00 N/A 2.817±0.00 0.304±0.00 N/A 0.556±0.28 N/A 0.073±0.00 N/A N/A N/A
ENST00000469020 N/A N/A 2.005±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470424 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.169±0.00 0.233±0.00 N/A N/A N/A
ENST00000554093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.460±0.00 11.319±0.00 3.451±1.05 6.784±0.00
ENST00000555653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.902±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00046X CIL_00046X_0001 CGP 14:45135940-45253540

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000775 IEA chromosome, centromeric region
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IEA protein binding
GO:0005654 TAS nucleoplasm
GO:0006334 TAS nucleosome assembly
GO:0007067 IEA mitotic nuclear division
GO:0034080 TAS CENP-A containing nucleosome assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042563 MIS18BP1 MIS18 binding protein 1 protein_coding Danio_rerio
ENSMUSG00000047534 Mis18bp1 MIS18 binding protein 1 protein_coding Mus_musculus

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