C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribonuclease, RNase A family, 1 (pancreatic)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000129538 RNASE1 9606 - 14:20801228-20803278 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000340900 RNASE1-002 20801346-20802855 protein_coding
  ENST00000397967 RNASE1-001 20801228-20803278 protein_coding
  ENST00000397970 RNASE1-003 20801460-20802848 protein_coding
  ENST00000412779 RNASE1-004 20801356-20802406 protein_coding
  ENST00000555698 RNASE1-005 20801394-20802848 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000340900ENST00000397967ENST00000397970ENST00000412779ENST00000555698
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000340900 176.967±0.00 103.542±0.00 1.287±0.00 53.158±46.44 56.081±46.67 34.305±30.92 36.671±32.62 23.317±21.43 12.055±6.02 54.840±40.38 10.698±7.87 105.867±20.30 462.752±84.94 167.673±0.00
ENST00000397967 48.064±0.00 14.528±0.00 4.249±0.00 6.780±0.00 14.143±5.66 6.803±0.00 8.100±0.00 1.629±0.00 6.848±5.60 20.496±9.95 4.714±1.43 12.987±7.59 N/A N/A
ENST00000397970 N/A N/A N/A 40.281±0.00 9.396±0.00 11.055±0.00 4.203±0.00 N/A 5.913±0.00 8.131±0.00 N/A 19.158±16.86 116.058±33.11 69.994±0.00
ENST00000412779 N/A N/A N/A 26.053±0.00 N/A N/A N/A N/A N/A N/A 2.660±0.00 N/A N/A N/A
ENST00000555698 388.526±0.00 149.705±0.00 N/A 82.467±0.00 215.334±0.00 120.399±0.00 177.128±0.00 85.777±0.00 10.982±0.00 330.650±0.00 31.415±28.25 53.937±28.05 278.014±44.26 327.738±45.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ED CIL_0004ED_0001 CGP 14:20781051-20803278
CIL_0004E7 CIL_0004E7_0001 CGP 14:20801228-20892348

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0004519 IEA endonuclease activity
GO:0004522 IEA pancreatic ribonuclease activity
GO:0005515 IPI protein binding
GO:0070062 IDA extracellular vesicular exosome
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis
GO:0090502 IEA RNA phosphodiester bond hydrolysis, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000035896 Rnase1 ribonuclease, RNase A family, 1 (pancreatic) protein_coding Mus_musculus

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