C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: erythrocyte membrane protein band 4.1 like 4A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000129595 EPB41L4A 9606 - 5:112142441-112419316 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261486 EPB41L4A-001 112162621-112419316 protein_coding
  ENST00000305368 EPB41L4A-002 112263408-112419313 retained_intron
  ENST00000507810 EPB41L4A-007 112142441-112228778 processed_transcript
  ENST00000509342 EPB41L4A-004 112165001-112183387 processed_transcript
  ENST00000511405 EPB41L4A-010 112239600-112264987 retained_intron
  ENST00000511790 EPB41L4A-011 112234634-112249190 processed_transcript
  ENST00000512395 EPB41L4A-005 112262553-112392784 processed_transcript
  ENST00000513333 EPB41L4A-009 112195661-112206062 processed_transcript
  ENST00000514203 EPB41L4A-006 112275239-112307402 retained_intron
  ENST00000515047 EPB41L4A-003 112170009-112205502 retained_intron
  ENST00000621003 EPB41L4A-201 112162618-112419313 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungMusclePlacentaTestisENST00000261486ENST00000515047ENST00000621003
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Muscle Placenta Testis
ENST00000261486 3.777±0.00 1.574±0.06 0.860±0.29 0.698±0.20 1.237±1.02 0.190±0.00 1.279±0.12 0.424±0.00 1.091±0.18 2.021±0.10
ENST00000515047 N/A 2.936±0.00 3.102±0.00 N/A N/A 4.054±0.00 N/A N/A 6.638±0.00 N/A
ENST00000621003 N/A N/A 0.560±0.00 0.465±0.00 0.214±0.00 N/A 1.402±0.00 N/A 0.824±0.04 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PC CIL_0008PC_0001 VISTA 5:111547843-112153084
CIL_0008TM CIL_0008TM_0001 VISTA 5:111547866-112149626
CIL_0005KL CIL_0005KL_0002 CGP 5:112142441-112846239

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008092 IEA cytoskeletal protein binding
GO:0008150 ND biological_process
GO:0019898 IEA extrinsic component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040087 epb41l4a erythrocyte membrane protein band 4.1 like 4A protein_coding Danio_rerio
ENSMUSG00000024376 Epb4.1l4a erythrocyte protein band 4.1-like 4a protein_coding Mus_musculus

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